RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 FAM35AQ86V20 835 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 C11orf74Q86VG3 221 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 FUKQ8N0W3 1084 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 GUF1Q8N442 669 aaKnown RBP15.39■□□□□ 0.05
MCF2L-210ENST00000409954 USP33Q8TEY7 942 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 DDX1Q92499 740 aaKnown RBP15.39■□□□□ 0.05
MCF2L-210ENST00000409954 PNKPQ96T60 521 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 DUSP9Q99956 384 aaKnown RBP15.39■□□□□ 0.05
MCF2L-210ENST00000409954 IMPG2Q9BZV3 1241 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 CYP3A43Q9HB55 503 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 CSNK1G1Q9HCP0 422 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 CFAP97Q9P2B7 532 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 ZDHHC9Q9Y397 364 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.39■□□□□ 0.05
MCF2L-210ENST00000409954 WDR87Q6ZQQ6 2873 aa15.39■□□□□ 0.05
MCF2L-210ENST00000409954 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-210ENST00000409954 K7EQS6 105 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 ADH1CP00326 375 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 ZDHHC11BP0C7U3 371 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 KRT13P13646 458 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 PSMC2P35998 433 aaKnown RBP15.38■□□□□ 0.05
MCF2L-210ENST00000409954 NDST1P52848 882 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 SLC5A3P53794 718 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 DPYDQ12882 1025 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 IFRD2Q12894 506 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-210ENST00000409954 ADAM9Q13443 819 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 USP39Q53GS9 565 aaKnown RBP15.38■□□□□ 0.05
MCF2L-210ENST00000409954 NAIF1Q69YI7 327 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-210ENST00000409954 KRBA2Q6ZNG9 492 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 NUDT18Q6ZVK8 323 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 KBTBD6Q86V97 674 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 CCDC150Q8NCX0 1101 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 SCAMP5Q8TAC9 235 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 EZH1Q92800 747 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-210ENST00000409954 FAXDC2Q96IV6 333 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 SDCBP2Q9H190 292 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 ARRDC1-AS1Q9H2J1 176 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 SMPD4Q9NXE4 827 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 CEP250Q9BV73 2442 aa15.38■□□□□ 0.05
MCF2L-210ENST00000409954 DCDC2BA2VCK2 349 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-210ENST00000409954 COCHO43405 550 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 ZNF202O95125 648 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 EPN2O95208 641 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 HLA-DRAP01903 254 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 CYP17A1P05093 508 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 NR2F2P24468 414 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 HOXC13P31276 330 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 GTF2H1P32780 548 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 GRIA2P42262 883 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 TNFRSF4P43489 277 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 DGKEP52429 567 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 MCCD1P59942 119 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-210ENST00000409954 GAD2Q05329 585 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 ELF2Q15723 593 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 C12orf50Q8NA57 414 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-210ENST00000409954 TSTD1Q8NFU3 115 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 KCNV2Q8TDN2 545 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 HNRNPABQ99729 332 aaKnown RBP15.37■□□□□ 0.05
MCF2L-210ENST00000409954 NT5C1AQ9BXI3 368 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 TLR8Q9NR97 1041 aaKnown RBP15.37■□□□□ 0.05
MCF2L-210ENST00000409954 SH3BP1Q9Y3L3 701 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 CACNA1AO00555 2505 aa15.37■□□□□ 0.05
MCF2L-210ENST00000409954 ALDH1A2O94788 518 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 APODP05090 189 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 PIK3CAP42336 1068 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 LIMK1P53667 647 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 GAB4Q2WGN9 574 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 PLK5Q496M5 336 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 C2orf27AQ580R0 203 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 C1orf220Q5T0J3 134 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 BTBD8Q5XKL5 378 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 SCARA5Q6ZMJ2 495 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 HTR3DQ70Z44 454 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 FAM186BQ8IYM0 893 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 TTC39CQ8N584 583 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 SLC2A14Q8TDB8 520 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 CYFIP2Q96F07 1278 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 HHIPQ96QV1 700 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 SMOQ99835 787 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 NACA2Q9H009 215 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 PNPLA8Q9NP80 782 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 VPS45Q9NRW7 570 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 POLR3BQ9NW08 1133 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-210ENST00000409954 MMP17Q9ULZ9 603 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 DENND4CQ5VZ89 1909 aa15.36■□□□□ 0.05
MCF2L-210ENST00000409954 STX10O60499 249 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 KAT7O95251 611 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 FAM200BP0CF97 657 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 ADH5P11766 374 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 ATP5C1P36542 298 aaKnown RBP15.35■□□□□ 0.05
MCF2L-210ENST00000409954 ASPAP45381 313 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 SLC6A11P48066 632 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 MAP3K7CLP57077 242 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 INCA1Q0VD86 236 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 CRY1Q16526 586 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 PLA2G2CQ5R387 149 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 LY6G5CQ5SRR4 150 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 C12orf29Q8N999 325 aa15.35■□□□□ 0.05
MCF2L-210ENST00000409954 ZMIZ2Q8NF64 920 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms