RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SNX30Q5VWJ9 437 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 PRR23CQ6ZRP0 262 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 ACOT1Q86TX2 421 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 OTUB2Q96DC9 234 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 HHIPQ96QV1 700 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 KCNK16Q96T55 309 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 SDCBP2Q9H190 292 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 CFAP97Q9P2B7 532 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 MYO16Q9Y6X6 1858 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 E2F8A0AVK6 867 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 TNFRSF10BO14763 440 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 CYP17A1P05093 508 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 NDST1P52848 882 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 ATXN1P54253 815 aaKnown RBP15.63■□□□□ 0.09
CBX3-203ENST00000409747 DPYDQ12882 1025 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 KRBA2Q6ZNG9 492 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 PAQR9Q6ZVX9 377 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 FUKQ8N0W3 1084 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 CRYBG2Q8N1P7 616 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 GUF1Q8N442 669 aaKnown RBP15.63■□□□□ 0.09
CBX3-203ENST00000409747 CCDC150Q8NCX0 1101 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 NACA2Q9H009 215 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 FBXO44Q9H4M3 255 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 IL37Q9NZH6 218 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 EBF1Q9UH73 591 aa15.63■□□□□ 0.09
CBX3-203ENST00000409747 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.63■□□□□ 0.09
CBX3-203ENST00000409747 MED19A0JLT2 244 aaPredicted RBP15.62■□□□□ 0.09
CBX3-203ENST00000409747 FAM92AA1XBS5 289 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.62■□□□□ 0.09
CBX3-203ENST00000409747 COCHO43405 550 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 HLA-DRAP01903 254 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 PRR29P0C7W0 189 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 OPRD1P41143 372 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 ASPAP45381 313 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 DHCR24Q15392 516 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 FAM186BQ8IYM0 893 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 ADGRG2Q8IZP9 1017 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 SCAMP5Q8TAC9 235 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 SLC2A14Q8TDB8 520 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 EZH1Q92800 747 aaPredicted RBP15.62■□□□□ 0.09
CBX3-203ENST00000409747 CYP3A43Q9HB55 503 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 CSNK1G1Q9HCP0 422 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 SH3BP1Q9Y3L3 701 aa15.62■□□□□ 0.09
CBX3-203ENST00000409747 EPN2O95208 641 aa15.61■□□□□ 0.09
CBX3-203ENST00000409747 FAM200BP0CF97 657 aa15.61■□□□□ 0.09
CBX3-203ENST00000409747 CCDC130P13994 396 aa15.61■□□□□ 0.09
CBX3-203ENST00000409747 PSMC2P35998 433 aaKnown RBP15.61■□□□□ 0.09
CBX3-203ENST00000409747 INCA1Q0VD86 236 aa15.61■□□□□ 0.09
CBX3-203ENST00000409747 PREPLQ4J6C6 727 aaPredicted RBP15.61■□□□□ 0.09
CBX3-203ENST00000409747 C11orf74Q86VG3 221 aa15.61■□□□□ 0.09
CBX3-203ENST00000409747 TSTD1Q8NFU3 115 aa15.61■□□□□ 0.09
CBX3-203ENST00000409747 ZC3H10Q96K80 434 aaKnown RBP15.61■□□□□ 0.09
CBX3-203ENST00000409747 DUSP9Q99956 384 aaKnown RBP15.61■□□□□ 0.09
CBX3-203ENST00000409747 GMIPQ9P107 970 aa15.61■□□□□ 0.09
CBX3-203ENST00000409747 PCDHGA5Q9Y5G8 931 aa15.61■□□□□ 0.09
CBX3-203ENST00000409747 RALGAPA1Q6GYQ0 2036 aa15.61■□□□□ 0.09
CBX3-203ENST00000409747 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.6■□□□□ 0.09
CBX3-203ENST00000409747 ZDHHC11BP0C7U3 371 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 ADH5P11766 374 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 HOXC13P31276 330 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 MRPS21P82921 87 aaKnown RBP15.6■□□□□ 0.09
CBX3-203ENST00000409747 ELF2Q15723 593 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 GAB4Q2WGN9 574 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 HSF5Q4G112 596 aaPredicted RBP15.6■□□□□ 0.09
CBX3-203ENST00000409747 C1orf220Q5T0J3 134 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 SPOPLQ6IQ16 392 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 KBTBD6Q86V97 674 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 C12orf50Q8NA57 414 aaPredicted RBP15.6■□□□□ 0.09
CBX3-203ENST00000409747 USP33Q8TEY7 942 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 ELMO3Q96BJ8 720 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 CHAMP1Q96JM3 812 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 PNKPQ96T60 521 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 NT5C1AQ9BXI3 368 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 NIF3L1Q9GZT8 377 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 TLR8Q9NR97 1041 aaKnown RBP15.6■□□□□ 0.09
CBX3-203ENST00000409747 HMGXB4Q9UGU5 601 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 CHORDC1Q9UHD1 332 aaPredicted RBP15.6■□□□□ 0.09
CBX3-203ENST00000409747 MAPK8IP1Q9UQF2 711 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 ATG2BQ96BY7 2078 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 SPAG17Q6Q759 2223 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 K7EQS6 105 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 SLC30A4O14863 429 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 ZNF202O95125 648 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 APODP05090 189 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 GTF2H1P32780 548 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 GCLMP48507 274 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 SEC13P55735 322 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 MAP3K7CLP57077 242 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 GOLGA8FQ08AF8 430 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 GOLGA8DPQ0D2H9 430 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 ADAM9Q13443 819 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 C2orf27AQ580R0 203 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 ZFRQ96KR1 1074 aaKnown RBP15.6■□□□□ 0.09
CBX3-203ENST00000409747 SMOQ99835 787 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 ARRDC1-AS1Q9H2J1 176 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 CCSER2Q9H7U1 834 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 TMEM8AQ9HCN3 771 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 PNPLA8Q9NP80 782 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 FAM49BQ9NUQ9 324 aa15.6■□□□□ 0.09
CBX3-203ENST00000409747 MMP17Q9ULZ9 603 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms