RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 RNF25Q96BH1 459 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-204ENST00000409727 RPGRIP1Q96KN7 1286 aa13.06□□□□□ -0.32
CHMP3-204ENST00000409727 ZNF558Q96NG5 402 aa13.06□□□□□ -0.32
CHMP3-204ENST00000409727 HINFPQ9BQA5 517 aa13.06□□□□□ -0.32
CHMP3-204ENST00000409727 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
CHMP3-204ENST00000409727 VN1R3Q9BXE9 311 aa13.06□□□□□ -0.32
CHMP3-204ENST00000409727 RC3H2Q9HBD1 1191 aaKnown RBP13.06□□□□□ -0.32
CHMP3-204ENST00000409727 CSNK1G1Q9HCP0 422 aa13.06□□□□□ -0.32
CHMP3-204ENST00000409727 ASNSD1Q9NWL6 643 aa13.06□□□□□ -0.32
CHMP3-204ENST00000409727 IL1R2P27930 398 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 MIPP30301 263 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 GPR15P49685 360 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 MRPL58Q14197 206 aaKnown RBP13.05□□□□□ -0.32
CHMP3-204ENST00000409727 EFHC1Q5JVL4 640 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 SCYL2Q6P3W7 929 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 HFE2Q6ZVN8 426 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 SLC26A9Q7LBE3 791 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 CMTR2Q8IYT2 770 aaKnown RBP13.05□□□□□ -0.32
CHMP3-204ENST00000409727 SCAMP5Q8TAC9 235 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 FAM172AQ8WUF8 416 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 TMEM169Q96HH4 297 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 KRT12Q99456 494 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 CNPY3Q9BT09 278 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 CDY1Q9Y6F8 540 aa13.05□□□□□ -0.32
CHMP3-204ENST00000409727 SYNJ2BP-COX16A0A087WUM0 186 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 TCRBV7S2A1N4TA0A589 114 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 OR6C75A6NL08 312 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 YJEFN3A6XGL0 299 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 E7ENQ6 273 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 SOAT2O75908 522 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 ZRANB2O95218 330 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHMP3-204ENST00000409727 SLC25A11Q02978 314 aaKnown RBP13.04□□□□□ -0.32
CHMP3-204ENST00000409727 NFE2Q16621 373 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-204ENST00000409727 DDR2Q16832 855 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 HADHQ16836 314 aaKnown RBP13.04□□□□□ -0.32
CHMP3-204ENST00000409727 USP41Q3LFD5 358 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 DCAF6Q58WW2 860 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 RAB41Q5JT25 222 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 TMEM240Q5SV17 173 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 ANKS3Q6ZW76 656 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 KATNAL2Q8IYT4 538 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 DEFB106AQ8N104 65 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 COLGALT1Q8NBJ5 622 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 GPR152Q8TDT2 470 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 HSPH1Q92598 858 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 PLVAPQ9BX97 442 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 HEMGNQ9BXL5 484 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 COX16Q9P0S2 106 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 USP18Q9UMW8 372 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 SLC27A5Q9Y2P5 690 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 NR2E1Q9Y466 385 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 LRRD1A4D1F6 860 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 H7C4K7 107 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 DYNC1I1O14576 645 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 ADAM12O43184 909 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 HSF2BPO75031 334 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 ZBED1O96006 694 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 LAG3P18627 525 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 DNAJB2P25686 324 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 SLC5A3P53794 718 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 ATXN1P54253 815 aaKnown RBP13.04□□□□□ -0.32
CHMP3-204ENST00000409727 DAOAP59103 153 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 YWHAZP63104 245 aaKnown RBP13.04□□□□□ -0.32
CHMP3-204ENST00000409727 KAZNQ674X7 775 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 RNF19BQ6ZMZ0 732 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 ANKS1BQ7Z6G8 1248 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 SLC39A11Q8N1S5 342 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 RAPGEF5Q92565 580 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 PEBP4Q96S96 227 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 SEPT5Q99719 369 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-204ENST00000409727 LRRC1Q9BTT6 524 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHMP3-204ENST00000409727 NAALADL1Q9UQQ1 740 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 PCDHB5Q9Y5E4 795 aa13.04□□□□□ -0.32
CHMP3-204ENST00000409727 PTPRSQ13332 1948 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 DPYSL4O14531 572 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 CAPN9O14815 690 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 FBXO21O94952 628 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 CSPG5O95196 566 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 GJB5O95377 273 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 RALAP11233 206 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 DESP17661 470 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 SULT1E1P49888 294 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 PITX1P78337 314 aaPredicted RBP13.03□□□□□ -0.32
CHMP3-204ENST00000409727 SLC7A5Q01650 507 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 PSMD5Q16401 504 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 SYPL2Q5VXT5 272 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 SLC13A5Q86YT5 568 aaPredicted RBP13.03□□□□□ -0.32
CHMP3-204ENST00000409727 FBXO22Q8NEZ5 403 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 EDEM1Q92611 657 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 DPF3Q92784 378 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 TBCBQ99426 244 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 NAP1L3Q99457 506 aaPredicted RBP13.03□□□□□ -0.32
CHMP3-204ENST00000409727 HERPUD2Q9BSE4 406 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 DDX47Q9H0S4 455 aaKnown RBP13.03□□□□□ -0.32
CHMP3-204ENST00000409727 ANKZF1Q9H8Y5 726 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 CNGB3Q9NQW8 809 aa13.03□□□□□ -0.32
CHMP3-204ENST00000409727 TTC7AQ9ULT0 858 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms