RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 SUMF1Q8NBK3 374 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 EXOC4Q96A65 974 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 CYFIP2Q96F07 1278 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 LINC00597Q9H2U6 94 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 CHORDC1Q9UHD1 332 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 CPQQ9Y646 472 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 GVINP1Q7Z2Y8 2422 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 TRIM49BA6NDI0 452 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 ZDHHC11BP0C7U3 371 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 ADORA2BP29275 332 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 GALK1P51570 392 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 NR1H3Q13133 447 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 DCAF17Q5H9S7 520 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 HECTD3Q5T447 861 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 TCERG1LQ5VWI1 586 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 ISM2Q6H9L7 571 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 FBXO44Q9H4M3 255 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 FAM124BQ9H5Z6 455 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 SMPD4Q9NXE4 827 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 ARMCX3Q9UH62 379 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 COQ4Q9Y3A0 265 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 CFAP54Q96N23 3096 aa20.76■□□□□ 0.91
TSPAN4-209ENST00000409543 EP300Q09472 2414 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 ZNF292O60281 2723 aa20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 COCHO43405 550 aa20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 NFATC1O95644 943 aa20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 MBL2P11226 248 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 CD44P16070 742 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 DRD1P21728 446 aa20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 TUBP50607 506 aa20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 CBWD6Q4V339 395 aa20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 CBWD3Q5JTY5 395 aa20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 CBWD5Q5RIA9 395 aa20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 DDX42Q86XP3 938 aaKnown RBP eCLIP20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 P2RY13Q9BPV8 354 aa20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 FBRSL1Q9HCM7 1045 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 GMIPQ9P107 970 aa20.75■□□□□ 0.91
TSPAN4-209ENST00000409543 MYH10P35580 1976 aa20.74■□□□□ 0.91
TSPAN4-209ENST00000409543 SLC9A3R1O14745 358 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-209ENST00000409543 BMP6P22004 513 aa20.74■□□□□ 0.91
TSPAN4-209ENST00000409543 CLEC20AQ6ZU45 233 aa20.74■□□□□ 0.91
TSPAN4-209ENST00000409543 CEP63Q96MT8 703 aa20.74■□□□□ 0.91
TSPAN4-209ENST00000409543 EPC1Q9H2F5 836 aa20.74■□□□□ 0.91
TSPAN4-209ENST00000409543 METTL14Q9HCE5 456 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-209ENST00000409543 PNPLA8Q9NP80 782 aa20.74■□□□□ 0.91
TSPAN4-209ENST00000409543 CISHQ9NSE2 258 aa20.74■□□□□ 0.91
TSPAN4-209ENST00000409543 CFAP97Q9P2B7 532 aa20.74■□□□□ 0.91
TSPAN4-209ENST00000409543 OTOGLQ3ZCN5 2332 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 PPP1R3GB7ZBB8 358 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 HHLA1C9JL84 531 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 K7ESF4 209 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 EGFP01133 1207 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 MORC3Q14149 939 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 FOXR2Q6PJQ5 311 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 FILIP1Q7Z7B0 1213 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 ADGRG2Q8IZP9 1017 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 RUBCNQ92622 972 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 CD101Q93033 1021 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 TATDN2Q93075 761 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 SLC35C1Q96A29 364 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 HEXIM2Q96MH2 286 aaKnown RBP20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 CCSER2Q9H7U1 834 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 SCML2Q9UQR0 700 aa20.73■□□□□ 0.91
TSPAN4-209ENST00000409543 ATG13O75143 517 aa20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 HOXA6P31267 233 aa20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 FBXO43Q4G163 708 aa20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 ZNF394Q53GI3 561 aa20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 PPP1R26Q5T8A7 1209 aaPredicted RBP20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 NAIF1Q69YI7 327 aaPredicted RBP20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 TTI2Q6NXR4 508 aa20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 TMEM176AQ96HP8 235 aa20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 ZFRQ96KR1 1074 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 ARID3AQ99856 593 aa20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 DUSP9Q99956 384 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 DUSP16Q9BY84 665 aa20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 TLR8Q9NR97 1041 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 C2orf42Q9NWW7 574 aa20.72■□□□□ 0.91
TSPAN4-209ENST00000409543 E2F8A0AVK6 867 aa20.71■□□□□ 0.91
TSPAN4-209ENST00000409543 CHURC1-FNTBB4DL54 471 aa20.71■□□□□ 0.91
TSPAN4-209ENST00000409543 RAD23BP54727 409 aa20.71■□□□□ 0.91
TSPAN4-209ENST00000409543 KLHL10Q6JEL2 608 aa20.71■□□□□ 0.91
TSPAN4-209ENST00000409543 GPRIN1Q7Z2K8 1008 aa20.71■□□□□ 0.91
TSPAN4-209ENST00000409543 SLC4A11Q8NBS3 891 aa20.71■□□□□ 0.91
TSPAN4-209ENST00000409543 NELFBQ8WX92 580 aa20.71■□□□□ 0.91
TSPAN4-209ENST00000409543 CHMP5Q9NZZ3 219 aa20.71■□□□□ 0.91
TSPAN4-209ENST00000409543 TBC1D14Q9P2M4 693 aa20.71■□□□□ 0.91
TSPAN4-209ENST00000409543 GPR179Q6PRD1 2367 aa20.71■□□□□ 0.91
TSPAN4-209ENST00000409543 BICDL2A1A5D9 508 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 BIN1O00499 593 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 PMM2O15305 246 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 TLR5O60602 858 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 RNF40O75150 1001 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 CYP17A1P05093 508 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 ACO1P21399 889 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 PGFP49763 221 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 UBE2HP62256 183 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 CUL2Q13617 745 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 DHCR24Q15392 516 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 ARHGAP17Q68EM7 881 aa20.7■□□□□ 0.9
TSPAN4-209ENST00000409543 PKN3Q6P5Z2 889 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms