RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TRPC7Q9HCX4 862 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 CGNQ9P2M7 1197 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 ZMYM5Q9UJ78 669 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 ODF2LQ9ULJ1 636 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 DMXL2Q8TDJ6 3036 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 ZFYVE26Q68DK2 2539 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 PTPRDP23468 1912 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 ATRXP46100 2492 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 C2orf78A6NCI8 922 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 K7EQS6 105 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 KLRC4O43908 158 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 FAM13AO94988 1023 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 PPP1R2P41236 205 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 ADKP55263 362 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 SEC13P55735 322 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 ZXDBP98169 803 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 AMPD2Q01433 879 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 SMARCB1Q12824 385 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 USP4Q13107 963 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 STIM1Q13586 685 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 GAB4Q2WGN9 574 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 GLIPR1L2Q4G1C9 344 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 DAB2IPQ5VWQ8 1189 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 OSTM1Q86WC4 334 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 CNGA4Q8IV77 575 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 SFTPA1Q8IWL2 248 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 CPA6Q8N4T0 437 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 ARL14EPQ8N8R7 260 aaPredicted RBP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 RASSF8Q8NHQ8 419 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 NOC3LQ8WTT2 800 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 GATA6Q92908 595 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 CCDC47Q96A33 483 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 PKMYT1Q99640 499 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 SRRTQ9BXP5 876 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 PARVGQ9HBI0 331 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 GCNT4Q9P109 453 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 AGO2Q9UKV8 859 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 C2CD2Q9Y426 696 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 ASCC3Q8N3C0 2202 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 MFAP3LO75121 409 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 NOL4O94818 638 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 ADSSP30520 456 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 OPRD1P41143 372 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 PRCPP42785 496 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 COPB1P53618 953 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 MESP2Q0VG99 397 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 COBLL1Q53SF7 1204 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 C2orf27AQ580R0 203 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 TCP11X2Q5H9J9 407 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 RASSF3Q86WH2 238 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 CCDC33Q8N5R6 958 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 KCTD17Q8N5Z5 321 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 FRMD1Q8N878 549 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 SH3RF2Q8TEC5 729 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 USP33Q8TEY7 942 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 MYRFLQ96LU7 910 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 C7orf25Q9BPX7 421 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 SCNM1Q9BWG6 230 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 ADAM33Q9BZ11 813 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 ZHX3Q9H4I2 956 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 THAP9Q9H5L6 903 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 GTF3C4Q9UKN8 822 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 STYXL1Q9Y6J8 313 aa13.54□□□□□ -0.24
CHRNA1-205ENST00000409542 SOBPA7XYQ1 873 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 KCNJ18B7U540 433 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 KHNYNO15037 678 aaKnown RBP13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 TPM1P09493 284 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 PLCG1P19174 1290 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 EEF1GP26641 437 aaKnown RBP13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 IFNAR2P48551 515 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 KCNJ12Q14500 433 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 UAP1L1Q3KQV9 507 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 USP39Q53GS9 565 aaKnown RBP13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 ANO7Q6IWH7 933 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 TMEM92Q6UXU6 159 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 DEFB124Q8NES8 71 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 MDGA1Q8NFP4 955 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 TSTD1Q8NFU3 115 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 RLN3Q8WXF3 142 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 ACDQ96AP0 544 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 DHTKD1Q96HY7 919 aaPredicted RBP13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 TMEM9BQ9NQ34 198 aa13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 DDX43Q9NXZ2 648 aaKnown RBP13.53□□□□□ -0.24
CHRNA1-205ENST00000409542 NBEAQ8NFP9 2946 aa13.52□□□□□ -0.24
CHRNA1-205ENST00000409542 TRAV19A0A0A6YYK7 116 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 SRRM3A6NNA2 597 aaPredicted RBP13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 PSMA7O14818 248 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 CKMP06732 381 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 USP17L7P0C7H9 530 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 CHRM1P11229 460 aaPredicted RBP13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 CEACAM1P13688 526 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 POLR2BP30876 1174 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 DHPSP49366 369 aaPredicted RBP13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 AMPD3Q01432 767 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 TSPY1Q01534 308 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 KCNA1Q09470 495 aa13.52□□□□□ -0.25
CHRNA1-205ENST00000409542 SV2CQ496J9 727 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms