RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 E7ESA3 106 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 MCF2LO15068 1137 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 BMP10O95393 424 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 ITGAVP06756 1048 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 KITP10721 976 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 CYP2C9P11712 490 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 BMP3P12645 472 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 POLD1P28340 1107 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 NMT1P30419 496 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 RXRGP48443 463 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 VAMP7P51809 220 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 SPIRE1Q08AE8 756 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 NFX1Q12986 1120 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 ACAP1Q15027 740 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 KCTD21Q4G0X4 260 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 TCHHL1Q5QJ38 904 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 SUSD4Q5VX71 490 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 SNRNP48Q6IEG0 339 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 GPR141Q7Z602 305 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 FBXO33Q7Z6M2 555 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 NUDCD3Q8IVD9 361 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 FBXO36Q8NEA4 188 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 PPP4R1Q8TF05 950 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 SLC44A1Q8WWI5 657 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 SHC3Q92529 594 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 DLG3Q92796 817 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 PLEKHA8Q96JA3 519 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 TMEM117Q9H0C3 514 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 SLC38A7Q9NVC3 462 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 THAP1Q9NVV9 213 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 ARHGAP26Q9UNA1 814 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 MYRFQ9Y2G1 1151 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 PLLPQ9Y342 182 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 FARP1Q9Y4F1 1045 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 ITGAXP20702 1163 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 SLC5A3P53794 718 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 ARPC4P59998 168 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 RPS3AP61247 264 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 TRPC3Q13507 836 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 COG2Q14746 738 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 RINT1Q6NUQ1 792 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 DCLRE1AQ6PJP8 1040 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 ZNF720Q7Z2F6 126 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 RSPH3Q86UC2 560 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 GPR180Q86V85 440 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 HPS6Q86YV9 775 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 RHPN2Q8IUC4 686 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 SEPT12Q8IYM1 358 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 CERKQ8TCT0 537 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 THAP11Q96EK4 314 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 NYXQ9GZU5 481 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 PAIP1Q9H074 479 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 HIPK3Q9H422 1215 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 PARVBQ9HBI1 364 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 TRNAU1APQ9NX07 287 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 RAB20Q9NX57 234 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 PRPF19Q9UMS4 504 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 DOLKQ9UPQ8 538 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 SNCAIPQ9Y6H5 919 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 NUP98P52948 1817 aa6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 FRMPD2Q68DX3 1309 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-202ENST00000409478 TNRC6CQ9HCJ0 1690 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 KRT37O76014 449 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 KRT38O76015 456 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 ZSCAN5DPP0CG00 497 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 NOVP48745 357 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 TXNL4AP83876 142 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 FAM182BQ5T319 152 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 C6orf52Q5T4I8 152 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 KRT39Q6A163 491 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 C16orf86Q6ZW13 317 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 FAM178BQ8IXR5 827 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 MCOLN2Q8IZK6 566 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 PDIK1LQ8N165 341 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 GLIS1Q8NBF1 620 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 GSDMBQ8TAX9 411 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 TMEM174Q8WUU8 243 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 ANKRD36BP1Q96IX9 119 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 DHX33Q9H6R0 707 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 CYP4F11Q9HBI6 524 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 PNPLA3Q9NST1 481 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 GINM1Q9NU53 330 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 STK39Q9UEW8 545 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 SNED1Q8TER0 1413 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 SGK1O00141 431 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 SLITRK3O94933 977 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 FBXO21O94952 628 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 CAPNS1P04632 268 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 PRDX5P30044 214 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 L1CAMP32004 1257 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 GSTO1P78417 241 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 STX3Q13277 289 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 PSMD6Q15008 389 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 CYTH1Q15438 398 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 RGS21Q2M5E4 152 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 LIN9Q5TKA1 542 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 PAOXQ6QHF9 649 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 SLC44A5Q8NCS7 719 aa6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 ZNF420Q8TAQ5 688 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-202ENST00000409478 SHKBP1Q8TBC3 707 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms