RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CCNE2O96020 404 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 PEX3P56589 373 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 MCCD1P59942 119 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-205ENST00000409455 ASPHQ12797 758 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 USP4Q13107 963 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 PTK7Q13308 1070 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 TBCCQ15814 346 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 FNBP1LQ5T0N5 605 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 NCAPG2Q86XI2 1143 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 PDSS2Q86YH6 399 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 PASD1Q8IV76 773 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 TMC2Q8TDI7 906 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 NKD2Q969F2 451 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-205ENST00000409455 SLC10A4Q96EP9 437 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 ZDHHC7Q9NXF8 308 aa16.1■□□□□ 0.17
LIMS2-205ENST00000409455 ZC3H11AO75152 810 aaKnown RBP eCLIP16.09■□□□□ 0.17
LIMS2-205ENST00000409455 FSTL1Q12841 308 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 MYBPC3Q14896 1274 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 MSS51Q4VC12 460 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 AAGABQ6PD74 315 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 TRIM72Q6ZMU5 477 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 SPOCD1Q6ZMY3 1216 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 DHDDSQ86SQ9 333 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 PRPF39Q86UA1 669 aaKnown RBP16.09■□□□□ 0.17
LIMS2-205ENST00000409455 SLC25A41Q8N5S1 370 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 SPIRE2Q8WWL2 714 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 GPRASP2Q96D09 838 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 VCPIP1Q96JH7 1222 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 SH3BP1Q9Y3L3 701 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 MAFGO15525 162 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 BUD23O43709 281 aaKnown RBP16.09■□□□□ 0.17
LIMS2-205ENST00000409455 VAV1P15498 845 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 RARRES1P49788 294 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 GAD2Q05329 585 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 PLEKHA7Q6IQ23 1121 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 KYAT3Q6YP21 454 aaKnown RBP16.09■□□□□ 0.17
LIMS2-205ENST00000409455 TRMT1LQ7Z2T5 733 aaKnown RBP16.09■□□□□ 0.17
LIMS2-205ENST00000409455 ADGRG6Q86SQ4 1221 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 FAM172AQ8WUF8 416 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 PREBQ9HCU5 417 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 TXNRD2Q9NNW7 524 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 PARVAQ9NVD7 372 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 SCN4AP35499 1836 aa16.09■□□□□ 0.17
LIMS2-205ENST00000409455 A6NJR5 290 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 CNMDO75829 334 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 INHBAP08476 426 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 HARSP12081 509 aaKnown RBP16.08■□□□□ 0.17
LIMS2-205ENST00000409455 IMPDH2P12268 514 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 QARSP47897 775 aaKnown RBP16.08■□□□□ 0.17
LIMS2-205ENST00000409455 TFDP3Q5H9I0 405 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 GPAT2Q6NUI2 795 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 FASTKD5Q7L8L6 764 aaKnown RBP16.08■□□□□ 0.17
LIMS2-205ENST00000409455 TRIM42Q8IWZ5 723 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 PDIK1LQ8N165 341 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 FEZF2Q8TBJ5 459 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 CPT1BQ92523 772 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 SERAC1Q96JX3 654 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 MAF1Q9H063 256 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 NDUFA13Q9P0J0 144 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 CNTN3Q9P232 1028 aa16.08■□□□□ 0.17
LIMS2-205ENST00000409455 E5RJQ4 531 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 NOMO3P69849 1222 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 HIC1Q14526 733 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 Q3C1V9 767 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 BBS9Q3SYG4 887 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 ANKRD22Q5VYY1 191 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 C7orf26Q96N11 449 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 C1orf21Q9H246 121 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 S100A14Q9HCY8 104 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 RBPJLQ9UBG7 517 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 FBXO40Q9UH90 709 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 IVNS1ABPQ9Y6Y0 642 aa16.08■□□□□ 0.16
LIMS2-205ENST00000409455 hCG_1818297A0A087WSY0 165 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 ASLP04424 464 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 SPATA31D3P0C874 917 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 UQCRBP14927 111 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 TCF4P15884 667 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 KCNA2P16389 499 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 TSHRP16473 764 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 STIP1P31948 543 aaKnown RBP16.07■□□□□ 0.16
LIMS2-205ENST00000409455 CCNFP41002 786 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 NCKAP1LP55160 1127 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 SLC18A2Q05940 514 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 CYP24A1Q07973 514 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 GRM2Q14416 872 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 UGCGQ16739 394 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 LRRC36Q1X8D7 754 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.07■□□□□ 0.16
LIMS2-205ENST00000409455 ATG16L1Q676U5 607 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 SPATA31D4Q6ZUB0 917 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 ARID3BQ8IVW6 561 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-205ENST00000409455 DNERQ8NFT8 737 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 PIP4K2CQ8TBX8 421 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 MIPOL1Q8TD10 442 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 LENG1Q96BZ8 264 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-205ENST00000409455 SH2D3AQ9BRG2 576 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 WDR83Q9BRX9 315 aaKnown RBP16.07■□□□□ 0.16
LIMS2-205ENST00000409455 RRAGCQ9HB90 399 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 ETNK2Q9NVF9 386 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 E7ESA3 106 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms