RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 GPR15P49685 360 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 IRX4P78413 519 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 SIM1P81133 766 aaPredicted RBP8.27□□□□□ -1.09
LSM5-202ENST00000409292 CYP27A1Q02318 531 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 ST3GAL1Q11201 340 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 RESTQ13127 1097 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 MCM6Q14566 821 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 DUOXA1Q1HG43 343 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 ZNF423Q2M1K9 1284 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 SDHAF4Q5VUM1 108 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 TDRD10Q5VZ19 366 aaKnown RBP8.27□□□□□ -1.09
LSM5-202ENST00000409292 BPHLQ86WA6 291 aaPredicted RBP8.27□□□□□ -1.09
LSM5-202ENST00000409292 BRSK2Q8IWQ3 736 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 PDZD8Q8NEN9 1154 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 SPATA17Q96L03 361 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 CYP2S1Q96SQ9 504 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 SYT15Q9BQS2 421 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 GTPBP2Q9BX10 602 aaKnown RBP8.27□□□□□ -1.09
LSM5-202ENST00000409292 NACA2Q9H009 215 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 SNX25Q9H3E2 840 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 ARHGEF4Q9NR80 690 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 GDAP2Q9NXN4 497 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 SUSD2Q9UGT4 822 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 CDH9Q9ULB4 789 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 L1RE1Q9UN81 338 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 MSRB2Q9Y3D2 182 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 STYXL1Q9Y6J8 313 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 KIF26AQ9ULI4 1882 aaPredicted RBP8.27□□□□□ -1.09
LSM5-202ENST00000409292 TCHHQ07283 1943 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 ATP8B3O60423 1300 aa8.27□□□□□ -1.09
LSM5-202ENST00000409292 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 TBC1D3BA6NDS4 549 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 SRRM3A6NNA2 597 aaPredicted RBP8.26□□□□□ -1.09
LSM5-202ENST00000409292 ANKRD63C9JTQ0 380 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 LEFTY2O00292 366 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 NDUFS2O75306 463 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 ZNF217O75362 1048 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 PRPF6O94906 941 aaKnown RBP8.26□□□□□ -1.09
LSM5-202ENST00000409292 KAT7O95251 611 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 GCNT3O95395 438 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 KLF8O95600 359 aaPredicted RBP8.26□□□□□ -1.09
LSM5-202ENST00000409292 MBL2P11226 248 aaPredicted RBP8.26□□□□□ -1.09
LSM5-202ENST00000409292 ADH5P11766 374 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 GNSP15586 552 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 ENGP17813 658 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 PLCG1P19174 1290 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 GARTP22102 1010 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 DDIT3P35638 169 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 P2RY2P41231 377 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 RPL6Q02878 288 aaKnown RBP8.26□□□□□ -1.09
LSM5-202ENST00000409292 GAD2Q05329 585 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 GOLGA8FQ08AF8 430 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 GOLGA8DPQ0D2H9 430 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 NNTQ13423 1086 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 E2F5Q15329 346 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 ZC2HC1CQ53FD0 456 aaPredicted RBP8.26□□□□□ -1.09
LSM5-202ENST00000409292 SYCP2LQ5T4T6 812 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 LCE2AQ5TA79 106 aaPredicted RBP8.26□□□□□ -1.09
LSM5-202ENST00000409292 KIAA1211LQ6NV74 962 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 SLC23A3Q6PIS1 610 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 SV2BQ7L1I2 683 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 ARMCX6Q7L4S7 300 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 HS2ST1Q7LGA3 356 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 ZNF720Q7Z2F6 126 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 BRAPQ7Z569 592 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 FILIP1Q7Z7B0 1213 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 TMEFF1Q8IYR6 380 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 TXNDC5Q8NBS9 432 aaKnown RBP8.26□□□□□ -1.09
LSM5-202ENST00000409292 MDGA1Q8NFP4 955 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 HMGB4Q8WW32 186 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 OTUB2Q96DC9 234 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 HPDLQ96IR7 371 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 MMS19Q96T76 1030 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 LRRC27Q9C0I9 530 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 FAM124BQ9H5Z6 455 aaPredicted RBP8.26□□□□□ -1.09
LSM5-202ENST00000409292 KIAA1586Q9HCI6 787 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 TMLHEQ9NVH6 421 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 POLR3BQ9NW08 1133 aaPredicted RBP8.26□□□□□ -1.09
LSM5-202ENST00000409292 GCNT4Q9P109 453 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 STK17AQ9UEE5 414 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 SH3BP1Q9Y3L3 701 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 THADAQ6YHU6 1953 aa8.26□□□□□ -1.09
LSM5-202ENST00000409292 TCRBV21S2A2A0A5A6 115 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 ZNF233A6NK53 670 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 UPK3BL1B0FP48 263 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 PATE3B3GLJ2 98 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 UPK3BL2E5RIL1 263 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 K7EQS6 105 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 CDX4O14627 284 aaPredicted RBP8.25□□□□□ -1.09
LSM5-202ENST00000409292 HYAL3O43820 417 aaPredicted RBP8.25□□□□□ -1.09
LSM5-202ENST00000409292 RTN3O95197 1032 aaPredicted RBP8.25□□□□□ -1.09
LSM5-202ENST00000409292 SERPINF2P08697 491 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 IDEP14735 1019 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 SPINK2P20155 84 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 BCKDHBP21953 392 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 BDNFP23560 247 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 HOXC13P31276 330 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 TNNC1P63316 161 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 SLC7A9P82251 487 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 SLC14A1Q13336 389 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms