RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ARL6IP4Q66PJ3 421 aaKnown RBP17.8■□□□□ 0.44
CHMP3-203ENST00000409225 RGL4Q8IZJ4 473 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 RASSF8Q8NHQ8 419 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 NOC3LQ8WTT2 800 aaKnown RBP17.8■□□□□ 0.44
CHMP3-203ENST00000409225 TTLL2Q9BWV7 592 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 ST6GALNAC4Q9H4F1 302 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 RBAKQ9NYW8 714 aaPredicted RBP17.8■□□□□ 0.44
CHMP3-203ENST00000409225 SIX4Q9UIU6 781 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 CDH9Q9ULB4 789 aa17.8■□□□□ 0.44
CHMP3-203ENST00000409225 MYO18AQ92614 2054 aaKnown RBP17.79■□□□□ 0.44
CHMP3-203ENST00000409225 PLXNB3Q9ULL4 1909 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 A0A1W2PQD8 194 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 SLC26A4O43511 780 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 OAS1P00973 400 aaKnown RBP17.79■□□□□ 0.44
CHMP3-203ENST00000409225 PDGFRBP09619 1106 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 GAD2Q05329 585 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 IFRD2Q12894 506 aaPredicted RBP17.79■□□□□ 0.44
CHMP3-203ENST00000409225 BTBD8Q5XKL5 378 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 ZNF720Q7Z2F6 126 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 SFR1Q86XK3 245 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 DDX42Q86XP3 938 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHMP3-203ENST00000409225 KBTBD7Q8WVZ9 684 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 ZSCAN31Q96LW9 406 aaPredicted RBP17.79■□□□□ 0.44
CHMP3-203ENST00000409225 AK8Q96MA6 479 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 MTMR12Q9C0I1 747 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 EHD2Q9NZN4 543 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 TBC1D14Q9P2M4 693 aa17.79■□□□□ 0.44
CHMP3-203ENST00000409225 APOBEC2Q9Y235 224 aaKnown RBP17.79■□□□□ 0.44
CHMP3-203ENST00000409225 GOLGA8IPA6NC78 632 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 GOLGA8JA6NMD2 632 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 F8VP50 259 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 TRIM66O15016 1216 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 ZBTB24O43167 697 aaPredicted RBP17.78■□□□□ 0.44
CHMP3-203ENST00000409225 TMEM191BP0C7N4 346 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 NDUFV2P19404 249 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 PPP3CCP48454 512 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 KCNA1Q09470 495 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 TAF10Q12962 218 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 SLCO6A1Q86UG4 719 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 MIB1Q86YT6 1006 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 ETFBKMTQ8IXQ9 262 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 KRI1Q8N9T8 703 aaKnown RBP17.78■□□□□ 0.44
CHMP3-203ENST00000409225 LARP4BQ92615 738 aaKnown RBP17.78■□□□□ 0.44
CHMP3-203ENST00000409225 HVCN1Q96D96 273 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 CEP295NLQ96MC4 621 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 PDE11AQ9HCR9 933 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 DEC1Q9P2X7 70 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 HCN2Q9UL51 889 aa17.78■□□□□ 0.44
CHMP3-203ENST00000409225 APC2O95996 2303 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 ACACAQ13085 2346 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 A0A1W2PQF6 199 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 TRIM24O15164 1050 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 NDUFS2O75306 463 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 ZNF217O75362 1048 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 TULP3O75386 442 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 NTSR1P30989 418 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 DDIT3P35638 169 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 NOP14P78316 857 aaKnown RBP17.77■□□□□ 0.44
CHMP3-203ENST00000409225 MYO1EQ12965 1108 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 MAPRE1Q15691 268 aaKnown RBP17.77■□□□□ 0.44
CHMP3-203ENST00000409225 MDH1BQ5I0G3 518 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 TDRD10Q5VZ19 366 aaKnown RBP17.77■□□□□ 0.44
CHMP3-203ENST00000409225 EGFLAMQ63HQ2 1017 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 TOGARAM2Q6ZUX3 1019 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 DYMQ7RTS9 669 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 TERB1Q8NA31 727 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 KCNV2Q8TDN2 545 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 PCED1BQ96HM7 432 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 FAM124BQ9H5Z6 455 aaPredicted RBP17.77■□□□□ 0.44
CHMP3-203ENST00000409225 CD93Q9NPY3 652 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 TBC1D7Q9P0N9 293 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 SUSD2Q9UGT4 822 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 EXOC7Q9UPT5 735 aa17.77■□□□□ 0.44
CHMP3-203ENST00000409225 R3HCC1Q9Y3T6 440 aaKnown RBP17.77■□□□□ 0.44
CHMP3-203ENST00000409225 CELSR3Q9NYQ7 3312 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 E2F8A0AVK6 867 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 PPP1R37O75864 691 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 MAOBP27338 520 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 GRIK2Q13002 908 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 ANO4Q32M45 955 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 PREPLQ4J6C6 727 aaPredicted RBP17.76■□□□□ 0.43
CHMP3-203ENST00000409225 SYCP2LQ5T4T6 812 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 NUDT18Q6ZVK8 323 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 DPH6Q7L8W6 267 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 HS2ST1Q7LGA3 356 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 IPO4Q8TEX9 1081 aaKnown RBP17.76■□□□□ 0.43
CHMP3-203ENST00000409225 ZNF419Q96HQ0 510 aaPredicted RBP17.76■□□□□ 0.43
CHMP3-203ENST00000409225 HPDLQ96IR7 371 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 C8orf48Q96LL4 319 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 SLITRK1Q96PX8 696 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 ACCSQ96QU6 501 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 ACOX2Q99424 681 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 SLC6A17Q9H1V8 727 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 MRPL44Q9H9J2 332 aaKnown RBP17.76■□□□□ 0.43
CHMP3-203ENST00000409225 SH3BP1Q9Y3L3 701 aa17.76■□□□□ 0.43
CHMP3-203ENST00000409225 HOXC11O43248 304 aaPredicted RBP17.75■□□□□ 0.43
CHMP3-203ENST00000409225 LDHAP00338 332 aaKnown RBP17.75■□□□□ 0.43
CHMP3-203ENST00000409225 GNSP15586 552 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 CACNA2D1P54289 1103 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 GRIN1Q05586 938 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms