RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 ARHGAP39Q9C0H5 1083 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 PRM3Q9NNZ6 103 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 DDX43Q9NXZ2 648 aaKnown RBP13.07□□□□□ -0.32
ATG9A-203ENST00000409033 FLRT1Q9NZU1 646 aa13.07□□□□□ -0.32
ATG9A-203ENST00000409033 A0A1B0GUA9 196 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 AP1G2O75843 785 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 MT-ND3P03897 115 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 PAEPP09466 180 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 CROCCP2Q86T23 111 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 DEPDC1BQ8WUY9 529 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 TNIP3Q96KP6 325 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 SNRNP25Q9BV90 132 aaKnown RBP13.06□□□□□ -0.32
ATG9A-203ENST00000409033 RSAD1Q9HA92 442 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 IGKV6-21A0A0C4DH24 114 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 KCNK1O00180 336 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 DNALI1O14645 258 aaPredicted RBP13.06□□□□□ -0.32
ATG9A-203ENST00000409033 FAM107AO95990 144 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 CDKN2BP42772 138 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 PKN2Q16513 984 aaKnown RBP13.06□□□□□ -0.32
ATG9A-203ENST00000409033 CA9Q16790 459 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 MFSD14CQ5VZR4 134 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 ZNF449Q6P9G9 518 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 DENND5BQ6ZUT9 1274 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 DEFB106AQ8N104 65 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 PYROXD2Q8N2H3 581 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 CYP3A43Q9HB55 503 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 BAIAP2L1Q9UHR4 511 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 AP4E1Q9UPM8 1137 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 IPPQ9Y573 584 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 VGLL3A8MV65 326 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 ATICP31939 592 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 RPL22P35268 128 aaKnown RBP13.06□□□□□ -0.32
ATG9A-203ENST00000409033 ERFP50548 548 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 CAV1Q03135 178 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 SIX1Q15475 284 aaPredicted RBP13.06□□□□□ -0.32
ATG9A-203ENST00000409033 PIGZQ86VD9 579 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 TTC30AQ86WT1 665 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 FBF1Q8TES7 1133 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 UBP1Q9NZI7 540 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 KLHL8Q9P2G9 620 aaPredicted RBP13.06□□□□□ -0.32
ATG9A-203ENST00000409033 GRIN2DO15399 1336 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 FER1L6Q2WGJ9 1857 aa13.06□□□□□ -0.32
ATG9A-203ENST00000409033 GPD2P43304 727 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 FLT3LGP49771 235 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 NDUFV1P49821 464 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 NBPF20Q3BBV1 942 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 ANKRD23Q86SG2 305 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 ZNF410Q86VK4 478 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 CCHCR1Q8TD31 782 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 PPM1EQ8WY54 764 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 RHOBTB2Q9BYZ6 727 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 KLC2Q9H0B6 622 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 MYADML2A6NDP7 307 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 SLC15A5A6NIM6 579 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 USP12O75317 370 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 CD4P01730 458 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 CD52P31358 61 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 GRM5P41594 1212 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 IL9RQ01113 521 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 OVGP1Q12889 678 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 BMPR2Q13873 1038 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 ZNF268Q14587 947 aaPredicted RBP13.05□□□□□ -0.32
ATG9A-203ENST00000409033 C9orf57Q5W0N0 161 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 TBC1D1Q86TI0 1168 aaPredicted RBP13.05□□□□□ -0.32
ATG9A-203ENST00000409033 EXOC3L1Q86VI1 746 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 CYP4X1Q8N118 509 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 ATP11CQ8NB49 1132 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 PITPNM3Q9BZ71 974 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 DDIT4Q9NX09 232 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 ST3GAL5Q9UNP4 418 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 MYO9BQ13459 2157 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 KRT4P19013 534 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 ELK3P41970 407 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 DEUP1Q05D60 604 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 ITKQ08881 620 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 MOGSQ13724 837 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 SPARCL1Q14515 664 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 CES3Q6UWW8 571 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 PID1Q7Z2X4 250 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 TADA2BQ86TJ2 420 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 PGLYRP2Q96PD5 576 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 FAM193BQ96PV7 902 aaPredicted RBP13.05□□□□□ -0.32
ATG9A-203ENST00000409033 TRIM56Q9BRZ2 755 aaKnown RBP13.05□□□□□ -0.32
ATG9A-203ENST00000409033 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.05□□□□□ -0.323e-12■□□□□ 9.9
ATG9A-203ENST00000409033 C2CD2Q9Y426 696 aa13.05□□□□□ -0.32
ATG9A-203ENST00000409033 H0YGN5 161 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 STK10O94804 968 aaKnown RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 TRUB2O95900 331 aaKnown RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 CYP2F1P24903 491 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 BRCC3P46736 316 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 AFF1P51825 1210 aaKnown RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 TKTL1P51854 596 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 GBE1Q04446 702 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 CRHR2Q13324 411 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 SV2CQ496J9 727 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 PTPRHQ9HD43 1115 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 FNDC3AQ9Y2H6 1198 aaKnown RBP13.04□□□□□ -0.32
ATG9A-203ENST00000409033 NFS1Q9Y697 457 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 TCRBV7S3A2A0A539 114 aa13.04□□□□□ -0.32
ATG9A-203ENST00000409033 SLC4A1P02730 911 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms