RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 H7C0C1 242 aa9.4□□□□□ -0.9
PSEN1-205ENST00000406768 TNPO2O14787 897 aaKnown RBP9.4□□□□□ -0.9
PSEN1-205ENST00000406768 STAM2O75886 525 aa9.4□□□□□ -0.9
PSEN1-205ENST00000406768 PARNO95453 639 aaKnown RBP9.4□□□□□ -0.9
PSEN1-205ENST00000406768 TGDSO95455 350 aa9.4□□□□□ -0.9
PSEN1-205ENST00000406768 PABPC1P11940 636 aaKnown RBP9.4□□□□□ -0.9
PSEN1-205ENST00000406768 ATP5OP48047 213 aa9.4□□□□□ -0.9
PSEN1-205ENST00000406768 HADHQ16836 314 aaKnown RBP9.4□□□□□ -0.9
PSEN1-205ENST00000406768 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
PSEN1-205ENST00000406768 HPS6Q86YV9 775 aa9.4□□□□□ -0.9
PSEN1-205ENST00000406768 FAM47BQ8NA70 645 aa9.4□□□□□ -0.9
PSEN1-205ENST00000406768 PDCD6IPQ8WUM4 868 aaKnown RBP9.4□□□□□ -0.9
PSEN1-205ENST00000406768 ARHGEF26Q96DR7 871 aa9.4□□□□□ -0.9
PSEN1-205ENST00000406768 APOPT1Q96IL0 206 aa9.4□□□□□ -0.9
PSEN1-205ENST00000406768 CDRT15Q96T59 188 aa9.4□□□□□ -0.9
PSEN1-205ENST00000406768 CLDN25C9JDP6 229 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 PDXKO00764 312 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 NEMP1O14524 444 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 MAGEB2O15479 319 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 CLOCKO15516 846 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 SEMA3DO95025 777 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 PRLP01236 227 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 CDH2P19022 906 aaPredicted RBP9.4□□□□□ -0.91
PSEN1-205ENST00000406768 CD58P19256 250 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 ME2P23368 584 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 BNIP3Q12983 259 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 PKN1Q16512 942 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 CEP78Q5JTW2 689 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 JADE1Q6IE81 842 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 CYP2U1Q7Z449 544 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 S100ZQ8WXG8 99 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 GLMNQ92990 594 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 SCYL1Q96KG9 808 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 CNDP1Q96KN2 507 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 CHST7Q9NS84 486 aa9.4□□□□□ -0.91
PSEN1-205ENST00000406768 CCNKO75909 580 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 TPPPO94811 219 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 TRIM49P0CI25 452 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 TRIM49CP0CI26 452 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 MUTP22033 750 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 SERPINB5P36952 375 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 PTGIRP43119 386 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 EIF3EP60228 445 aaKnown RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 GNA12Q03113 381 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 INPP5AQ14642 412 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 EFTUD2Q15029 972 aaKnown RBP eCLIP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 MOGQ16653 247 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 TTC39BQ5VTQ0 682 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 LRRC55Q6ZSA7 311 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 IRF2BP2Q7Z5L9 587 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 ZCCHC9Q8N567 271 aaKnown RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 USP13Q92995 863 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 AZIN2Q96A70 460 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 SMARCAD1Q9H4L7 1026 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 LRRC19Q9H756 370 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 LRRC4CQ9HCJ2 640 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 TBC1D14Q9P2M4 693 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 PCDHGA3Q9Y5H0 932 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 MYO3BQ8WXR4 1341 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 ILVBLA1L0T0 632 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 SAC3D1A6NKF1 404 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 DDX3YO15523 660 aaKnown RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 TPST1O60507 370 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 NR4A1P22736 598 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 CYP4A11Q02928 519 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 MSLNQ13421 630 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 PRKG1Q13976 671 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 PRPSAP1Q14558 356 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 ZYXQ15942 572 aaKnown RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 ELMSAN1Q6PJG2 1045 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 DCDC5Q6ZRR9 648 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 ADGRG6Q86SQ4 1221 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 PRUNE1Q86TP1 453 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 POC5Q8NA72 575 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 BHLHE22Q8NFJ8 381 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 MAGED4Q96JG8 741 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 UNKQ9C0B0 810 aaKnown RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 SLC52A2Q9HAB3 445 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 EFCAB1Q9HAE3 211 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 CDH22Q9UJ99 828 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 KANSL1LA0AUZ9 987 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 GOLGA8JA6NMD2 632 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 KPNA7A9QM74 516 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 DCXO43602 365 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 TMEM191BP0C7N4 346 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 HSPA1AP0DMV8 641 aaKnown RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 HSPA1BP0DMV9 641 aaKnown RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 ZNF23P17027 643 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 GAP43P17677 238 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 RRM1P23921 792 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 MARCKSL1P49006 195 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 BST1Q10588 318 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 TFDP1Q14186 410 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 CLPPQ16740 277 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 C4orf22Q6V702 233 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 MARVELD2Q8N4S9 558 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 RASSF5Q8WWW0 418 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 C12orf43Q96C57 262 aaKnown RBP9.39□□□□□ -0.91
PSEN1-205ENST00000406768 FAF2Q96CS3 445 aa9.39□□□□□ -0.91
PSEN1-205ENST00000406768 PPP1R36Q96LQ0 422 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms