RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 ITIH5Q86UX2 942 aa28.26■■■□□ 2.11
CGREF1-204ENST00000402550 PHF13Q86YI8 300 aaPredicted RBP28.26■■■□□ 2.11
CGREF1-204ENST00000402550 KCTD13Q8WZ19 329 aa28.26■■■□□ 2.11
CGREF1-204ENST00000402550 ISCUQ9H1K1 167 aa28.26■■■□□ 2.11
CGREF1-204ENST00000402550 TAS2R14Q9NYV8 317 aa28.26■■■□□ 2.11
CGREF1-204ENST00000402550 CYTH4Q9UIA0 394 aa28.26■■■□□ 2.11
CGREF1-204ENST00000402550 USP15Q9Y4E8 981 aaPredicted RBP28.26■■■□□ 2.11
CGREF1-204ENST00000402550 GRXCR2A6NFK2 248 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 MBTPS2O43462 519 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 CSH1P0DML2 217 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 CSH2P0DML3 217 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 MTMR3Q13615 1198 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 DENND5BQ6ZUT9 1274 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 SUSD6Q92537 303 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 TRIM11Q96F44 468 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 RIPOR3Q96MK2 946 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 CPXM1Q96SM3 734 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 CORO1BQ9BR76 489 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 SLC4A5Q9BY07 1137 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 LRRC3Q9BY71 257 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 ADAM22Q9P0K1 906 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 STRIP2Q9ULQ0 834 aa28.25■■■□□ 2.11
CGREF1-204ENST00000402550 ZNF638Q14966 1978 aaKnown RBP28.25■■■□□ 2.11
CGREF1-204ENST00000402550 FAM170AA1A519 330 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 SLC38A8A6NNN8 435 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 CALB1P05937 261 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 HMGA1P17096 107 aaKnown RBP28.24■■■□□ 2.11
CGREF1-204ENST00000402550 MMP8P22894 467 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 SMAD4Q13485 552 aaKnown RBP28.24■■■□□ 2.11
CGREF1-204ENST00000402550 TAF12Q16514 161 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 PTPN20Q4JDL3 420 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 HS6ST3Q8IZP7 471 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 NUP93Q8N1F7 819 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 SIX6OS1Q8N1H7 587 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 C18orf8Q96DM3 657 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 VCPIP1Q96JH7 1222 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 C11orf70Q9BRQ4 267 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 THEGQ9P2T0 379 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 NOTCH4Q99466 2003 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 HHLA1C9JL84 531 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 TNFRSF10BO14763 440 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 MTHFRP42898 656 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 NTHL1P78549 312 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 C1QBPQ07021 282 aaKnown RBP28.24■■■□□ 2.11
CGREF1-204ENST00000402550 MMS22LQ6ZRQ5 1243 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 TMEM110Q86TL2 294 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 TXLNBQ8N3L3 684 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 WDR6Q9NNW5 1121 aaKnown RBP28.24■■■□□ 2.11
CGREF1-204ENST00000402550 EHD2Q9NZN4 543 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 NENFQ9UMX5 172 aa28.24■■■□□ 2.11
CGREF1-204ENST00000402550 MYO16Q9Y6X6 1858 aa28.23■■■□□ 2.11
CGREF1-204ENST00000402550 E5RJQ4 531 aa28.23■■■□□ 2.11
CGREF1-204ENST00000402550 RHOP08100 348 aa28.23■■■□□ 2.11
CGREF1-204ENST00000402550 MAGEA1P43355 309 aa28.23■■■□□ 2.11
CGREF1-204ENST00000402550 RPL34P49207 117 aaKnown RBP28.23■■■□□ 2.11
CGREF1-204ENST00000402550 SLC5A3P53794 718 aa28.23■■■□□ 2.11
CGREF1-204ENST00000402550 ADIGQ0VDE8 80 aa28.23■■■□□ 2.11
CGREF1-204ENST00000402550 CBX2Q14781 532 aaPredicted RBP28.23■■■□□ 2.11
CGREF1-204ENST00000402550 MYRFLQ96LU7 910 aa28.23■■■□□ 2.11
CGREF1-204ENST00000402550 MAGED2Q9UNF1 606 aaPredicted RBP28.23■■■□□ 2.11
CGREF1-204ENST00000402550 RTN3O95197 1032 aaPredicted RBP28.22■■■□□ 2.11
CGREF1-204ENST00000402550 H2AFZP0C0S5 128 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 MYBL1P10243 752 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 LCP1P13796 627 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 TKTL1P51854 596 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 EPHA5P54756 1037 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 USP46P62068 366 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 PABPC1LQ4VXU2 614 aaKnown RBP28.22■■■□□ 2.11
CGREF1-204ENST00000402550 H2AFVQ71UI9 128 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 MON1BQ7L1V2 547 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 MCOLN2Q8IZK6 566 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 NECTIN4Q96NY8 510 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 FBXO44Q9H4M3 255 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 ZNF334Q9HCZ1 680 aaPredicted RBP28.22■■■□□ 2.11
CGREF1-204ENST00000402550 ASAH2Q9NR71 780 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 PCDHA13Q9Y5I0 950 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 UNC80Q8N2C7 3258 aa28.22■■■□□ 2.11
CGREF1-204ENST00000402550 ANKRD62A6NC57 917 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 ZNF263O14978 683 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 ABCB4P21439 1286 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 GABRB2P47870 512 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 RAB41Q5JT25 222 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 CYP4A22Q5TCH4 519 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 PTCRAQ6ISU1 281 aaPredicted RBP28.21■■■□□ 2.11
CGREF1-204ENST00000402550 TOGARAM2Q6ZUX3 1019 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 TMC8Q8IU68 726 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 ZDHHC17Q8IUH5 632 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 SCAMP5Q8TAC9 235 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 CTNNBL1Q8WYA6 563 aaPredicted RBP28.21■■■□□ 2.11
CGREF1-204ENST00000402550 TRMT2BQ96GJ1 504 aaKnown RBP28.21■■■□□ 2.11
CGREF1-204ENST00000402550 DESI2Q9BSY9 194 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 WDR35Q9P2L0 1181 aa28.21■■■□□ 2.11
CGREF1-204ENST00000402550 PIK3R2O00459 728 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 FBXO21O94952 628 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 CCDC175P0C221 793 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 IFRD2Q12894 506 aaPredicted RBP28.2■■■□□ 2.11
CGREF1-204ENST00000402550 AAK1Q2M2I8 961 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 PUS10Q3MIT2 529 aaKnown RBP28.2■■■□□ 2.11
CGREF1-204ENST00000402550 HS1BP3Q53T59 392 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 GPRIN1Q7Z2K8 1008 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms