RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 MSCO60682 206 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 ITGB3P05106 788 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 RBL1P28749 1068 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 PGM1P36871 562 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 CLCN3P51790 818 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 ROR1Q01973 937 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 CHI3L2Q15782 390 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 TRNP1Q6NT89 227 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 CEP128Q6ZU80 1094 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 XYLT1Q86Y38 959 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 LMNTD2Q8IXW0 634 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 USP6NLQ92738 828 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 STMN2Q93045 179 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 LPIN3Q9BQK8 851 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 CEP41Q9BYV8 373 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 ACAD9Q9H845 621 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 SMYD2Q9NRG4 433 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 LRRC42Q9Y546 428 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 NFASCO94856 1347 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 COL2A1P02458 1487 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 BRWD3Q6RI45 1802 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 H0YCG3 227 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 ZCCHC18P0CG32 403 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 ATP6V1C1P21283 382 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 RTP1P59025 263 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 CDK16Q00536 496 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 UBAP2LQ14157 1087 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 STXBP2Q15833 593 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 TSNAXIP1Q2TAA8 658 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 LRRC38Q5VT99 294 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 CIAPIN1Q6FI81 312 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 MPP5Q8N3R9 675 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 POU5F2Q8N7G0 328 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 PTCD3Q96EY7 689 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 OXNAD1Q96HP4 312 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 HEXIM2Q96MH2 286 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 EBF4Q9BQW3 602 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 ADPGKQ9BRR6 497 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 THTPAQ9BU02 230 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 XYLT2Q9H1B5 865 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 DCLRE1BQ9H816 532 aa11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 MAGED2Q9UNF1 606 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-203ENST00000400556 SMIM24O75264 130 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 LYPLA1O75608 230 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 TOM1L1O75674 476 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 WFS1O76024 890 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 KRT7P08729 469 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 HOXC6P09630 235 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 NEK3P51956 506 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 ATXN1P54253 815 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 GHRHRQ02643 423 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 TEX2Q8IWB9 1127 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 KBTBD2Q8IY47 623 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 UBR7Q8N806 425 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 FLAD1Q8NFF5 587 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 PPP1R13LQ8WUF5 828 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 CNKSR2Q8WXI2 1034 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 TEX13BQ9BXU2 312 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 ZCWPW1Q9H0M4 648 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 MINDY3Q9H8M7 445 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 PICK1Q9NRD5 415 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 MAFBQ9Y5Q3 323 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 IQANK1A0A1B0GTG1 560 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 SIGLEC16A6NMB1 481 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 SORBS2O94875 1100 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 HMGCRP04035 888 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 ETV4P43268 484 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 LAMTOR4Q0VGL1 99 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 PEX6Q13608 980 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 CA9Q16790 459 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 HSDL1Q3SXM5 330 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 CDCA2Q69YH5 1023 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 WDR49Q8IV35 697 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 REPS2Q8NFH8 660 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 APOPT1Q96IL0 206 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 ACSS2Q9NR19 701 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 ZC3H7BQ9UGR2 993 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 CORO1CQ9ULV4 474 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 DCAF8L1A6NGE4 600 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 FAM189A1O60320 539 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 LUC7L3O95232 432 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 PDGFRAP16234 1089 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 PTPRAP18433 802 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 EIF4BP23588 611 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 AQP5P55064 265 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 KRT81Q14533 505 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 PRKD1Q15139 912 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 HSF5Q4G112 596 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 WDR78Q5VTH9 848 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 PCGF5Q86SE9 256 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 CFAP61Q8NHU2 1237 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 RXFP2Q8WXD0 754 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 MRPL4Q9BYD3 311 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 ELOVL4Q9GZR5 314 aa11.01□□□□□ -0.65
PPP4R1-203ENST00000400556 VPS11Q9H270 941 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms