RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ARHGEF4Q9NR80 690 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 AGPAT3Q9NRZ7 376 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 BCCIPQ9P287 314 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC00544-201ENST00000400540 GON4LQ3T8J9 2241 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 TCRBV21S2A2A0A5A6 115 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 COCHO43405 550 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 TACC1O75410 805 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 ALDH1A2O94788 518 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 TNNI1P19237 187 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 PDCP20941 246 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 MAPK8P45983 427 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 CYP2J2P51589 502 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 TNNC1P63316 161 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 CYP24A1Q07973 514 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 E2F4Q16254 413 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 MAP7D1Q3KQU3 841 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 WDR72Q3MJ13 1102 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 LY6G5CQ5SRR4 150 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 KIAA1211LQ6NV74 962 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 NELFCDQ8IXH7 590 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 NAT16Q8N8M0 369 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 B3GALNT2Q8NCR0 500 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 SCAMP5Q8TAC9 235 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 WHAMMQ8TF30 809 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 ZNF516Q92618 1163 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 WBP2Q969T9 261 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 SLITRK1Q96PX8 696 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 KCNK16Q96T55 309 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 TRIM9Q9C026 710 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 ELOVL4Q9GZR5 314 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 TNMDQ9H2S6 317 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 SMYD3Q9H7B4 428 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
LINC00544-201ENST00000400540 EHD2Q9NZN4 543 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
LINC00544-201ENST00000400540 MTMR6Q9Y217 621 aa12.68□□□□□ -0.38
LINC00544-201ENST00000400540 PCNX2A6NKB5 2137 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 A8MXQ7 604 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 SLC9A3R1O14745 358 aaPredicted RBP12.67□□□□□ -0.38
LINC00544-201ENST00000400540 TRIM24O15164 1050 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 EIF3DO15371 548 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC00544-201ENST00000400540 ADH1CP00326 375 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 CEACAM1P13688 526 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 ENGP17813 658 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 CSRP1P21291 193 aaKnown RBP12.67□□□□□ -0.38
LINC00544-201ENST00000400540 YWHAQP27348 245 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 CASP1P29466 404 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 EIF2DP41214 584 aaKnown RBP12.67□□□□□ -0.38
LINC00544-201ENST00000400540 PPP3CCP48454 512 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 CASP4P49662 377 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 CDH8P55286 799 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 MYL6P60660 151 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 ASIC1P78348 528 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 PSMD6Q15008 389 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 STXBP4Q6ZWJ1 553 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 LPCAT2Q7L5N7 544 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 NUP93Q8N1F7 819 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 DEFB119Q8N690 84 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 ZNF507Q8TCN5 953 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 FBXO32Q969P5 355 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 DHX58Q96C10 678 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 ERLEC1Q96DZ1 483 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 SPACA7Q96KW9 195 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 SCNM1Q9BWG6 230 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 XYLT2Q9H1B5 865 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 CCSER2Q9H7U1 834 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 POLMQ9NP87 494 aaPredicted RBP12.67□□□□□ -0.38
LINC00544-201ENST00000400540 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 KBTBD4Q9NVX7 518 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 CHORDC1Q9UHD1 332 aaPredicted RBP12.67□□□□□ -0.38
LINC00544-201ENST00000400540 EVLQ9UI08 416 aaPredicted RBP12.67□□□□□ -0.38
LINC00544-201ENST00000400540 HCN2Q9UL51 889 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 MORC2Q9Y6X9 1032 aaPredicted RBP12.67□□□□□ -0.38
LINC00544-201ENST00000400540 ZFYVE26Q68DK2 2539 aa12.67□□□□□ -0.38
LINC00544-201ENST00000400540 TP53BP1Q12888 1972 aaPredicted RBP12.67□□□□□ -0.38
LINC00544-201ENST00000400540 PKD1L2Q7Z442 2459 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 A0A0A0MRY4 1105 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 TNFRSF10BO14763 440 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 MAP3K13O43283 966 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 IRF1P10914 325 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 ITPKAP23677 461 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 GRIA2P42262 883 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 WASP42768 502 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
LINC00544-201ENST00000400540 PGFP49763 221 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 SLC5A3P53794 718 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 EOGTQ5NDL2 527 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 FAM26FQ5R3K3 315 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 LYSMD4Q5XG99 296 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 SCARA5Q6ZMJ2 495 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 PAQR9Q6ZVX9 377 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 FAM35AQ86V20 835 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 DDX42Q86XP3 938 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00544-201ENST00000400540 MIB1Q86YT6 1006 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 BBS7Q8IWZ6 715 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 ETFBKMTQ8IXQ9 262 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 PGBD3Q8N328 593 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 KIAA1958Q8N8K9 716 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 PLEKHO2Q8TD55 490 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms