RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 USP39Q53GS9 565 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 AGAP9Q5VTM2 703 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 C16orf87Q6PH81 154 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 ICA1LQ8NDH6 482 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 ADAM2Q99965 735 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 TRIM9Q9C026 710 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 USE1Q9NZ43 259 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 SMIM22K7EJ46 135 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 SEC24DO94855 1032 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 GUCY2CP25092 1073 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 STX3Q13277 289 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 FBXO47Q5MNV8 452 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 ZNF655Q8N720 491 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 SMAD5Q99717 465 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 EPC1Q9H2F5 836 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 USP31Q70CQ4 1352 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 ZCCHC8Q6NZY4 707 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 FAM83AQ86UY5 434 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 COMMD2Q86X83 199 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 DDX42Q86XP3 938 aaKnown RBP eCLIP12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 FAM71DQ8N9W8 422 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 CEP70Q8NHQ1 597 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 P2RX7Q99572 595 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 ZDHHC6Q9H6R6 413 aa12.48□□□□□ -0.41
CACNA1C-213ENST00000399629 ATP8B1O43520 1251 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 CST8O60676 142 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 PABPC1LQ4VXU2 614 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ALKBH2Q6NS38 261 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ZNF557Q8N988 423 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 POMGNT2Q8NAT1 580 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 DEFB118Q96PH6 123 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 FICDQ9BVA6 458 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ABCB6Q9NP58 842 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 GGT7Q9UJ14 662 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 NEU2Q9Y3R4 380 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ANO9A1A5B4 782 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 LRRC14BA6NHZ5 514 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ARHGEF9O43307 516 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ADCYAP1R1P41586 468 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 SERPINB4P48594 390 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 TMED1Q13445 227 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 CYP4Z1Q86W10 505 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 TRIT1Q9H3H1 467 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 TRABDQ9H4I3 376 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 TAF1DQ9H5J8 278 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 TNFSF13BQ9Y275 285 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 TMX2Q9Y320 296 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 PRR23D1E9PI22 279 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 PRR23D2P0DMB1 279 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 CCR1P32246 355 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 LRRC14Q15048 493 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 SIRT2Q8IXJ6 389 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 SMARCD1Q96GM5 515 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 GPRC5CQ9NQ84 441 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ATP6V1HQ9UI12 483 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 TGM2P21980 687 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 JAK1P23458 1154 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 BST2Q10589 180 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 TBL3Q12788 808 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 PTK7Q13308 1070 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 RABL6Q3YEC7 729 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ZNF544Q6NX49 715 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 LGI2Q8N0V4 545 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 USP7Q93009 1102 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 WNK4Q96J92 1243 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 IL1RL2Q9HB29 575 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 MIEF1Q9NQG6 463 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 MPP6Q9NZW5 540 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 GPSM3Q9Y4H4 160 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ATMINO43313 823 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 PLA2G6O60733 806 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 EPC2Q52LR7 807 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 LRRC8BQ6P9F7 803 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 TRIM69Q86WT6 500 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ABTB1Q969K4 478 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 TMEM159Q96B96 161 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 MRPL48Q96GC5 212 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 BPIFA3Q9BQP9 254 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 FANCEQ9HB96 536 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 ATP13A1Q9HD20 1204 aa12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 FBXO2Q9UK22 296 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-213ENST00000399629 CPSF4O95639 269 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 ACTN3Q08043 901 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 CYP20A1Q6UW02 462 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 KRT84Q9NSB2 600 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 AHSPQ9NZD4 102 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 USP18Q9UMW8 372 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 SNX8Q9Y5X2 465 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 KRT33AO76009 404 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 ENO3P13929 434 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 OR1E1P30953 314 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 MAP2K2P36507 400 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 CASP8Q14790 479 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 GALNTL6Q49A17 601 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 BOLA3Q53S33 107 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 RARS2Q5T160 578 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 ANO5Q75V66 913 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 OTOAQ7RTW8 1153 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 MAP3K14Q99558 947 aa12.46□□□□□ -0.41
CACNA1C-213ENST00000399629 FAM118BQ9BPY3 351 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms