RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 EML3Q32P44 896 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 CBWD6Q4V339 395 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 DCAF17Q5H9S7 520 aaPredicted RBP15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 CBWD3Q5JTY5 395 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 CBWD5Q5RIA9 395 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 SCAMP5Q8TAC9 235 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 SLC35C1Q96A29 364 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 EXOC4Q96A65 974 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 CYFIP2Q96F07 1278 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 RNF38Q9H0F5 515 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 FBXO44Q9H4M3 255 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 ECT2Q9H8V3 914 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 ZSCAN32Q9NX65 697 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 PPP1R3GB7ZBB8 358 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 LEFTY2O00292 366 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 BEST1O76090 585 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 CD58P19256 250 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 BMP6P22004 513 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 MAP3K7CLP57077 242 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 UBE2HP62256 183 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 TMEM196Q5HYL7 178 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 ISM2Q6H9L7 571 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 TTI2Q6NXR4 508 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 CLEC20AQ6ZU45 233 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 FILIP1Q7Z7B0 1213 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 DDX42Q86XP3 938 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 RBM12Q9NTZ6 932 aaKnown RBP15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 CPQQ9Y646 472 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 WNT6Q9Y6F9 365 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 SPTBN4Q9H254 2564 aa15.74■□□□□ 0.11
SMIM11A-203ENST00000399299 BICDL2A1A5D9 508 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 PMM2O15305 246 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 LILRB5O75023 590 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 NFATC1O95644 943 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 ABL1P00519 1130 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 ADORA2BP29275 332 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 GJA4P35212 333 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 CXCL12P48061 93 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 NRLP54845 237 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 NR1H3Q13133 447 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 HECTD3Q5T447 861 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 TRIML1Q8N9V2 468 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 DUSP9Q99956 384 aaKnown RBP15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 CISHQ9NSE2 258 aa15.73■□□□□ 0.11
SMIM11A-203ENST00000399299 HHLA1C9JL84 531 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 SLC9A3R1O14745 358 aaPredicted RBP15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 MBL2P11226 248 aaPredicted RBP15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 DRD1P21728 446 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 SATB1Q01826 763 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 GRSF1Q12849 480 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 KLHL10Q6JEL2 608 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 FSTL4Q6MZW2 842 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 TSSK4Q6SA08 328 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 Q6ZS52 159 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 SLC4A11Q8NBS3 891 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 TTC16Q8NEE8 873 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 NELFBQ8WX92 580 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 ATRIPQ8WXE1 791 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 TATDN2Q93075 761 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 ZFRQ96KR1 1074 aaKnown RBP15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 TLR8Q9NR97 1041 aaKnown RBP15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 GMIPQ9P107 970 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 CHORDC1Q9UHD1 332 aaPredicted RBP15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 SCML2Q9UQR0 700 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 KIAA1549LQ6ZVL6 1849 aa15.72■□□□□ 0.11
SMIM11A-203ENST00000399299 COCHO43405 550 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 FMO5P49326 533 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 RAD23BP54727 409 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 YWHAEP62258 255 aaKnown RBP15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 PAK1Q13153 545 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 CUL2Q13617 745 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 CCDC40Q4G0X9 1142 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 FBXO43Q4G163 708 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 ZNF394Q53GI3 561 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 PPP1R26Q5T8A7 1209 aaPredicted RBP15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 GPRIN1Q7Z2K8 1008 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 SUMF1Q8NBK3 374 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 TMEM176AQ96HP8 235 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 ARID3AQ99856 593 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 P2RY13Q9BPV8 354 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 DUSP16Q9BY84 665 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 LINC00597Q9H2U6 94 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 CCSER2Q9H7U1 834 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 CYLDQ9NQC7 956 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 SMPD4Q9NXE4 827 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 CFAP97Q9P2B7 532 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 CTNND2Q9UQB3 1225 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 GPR179Q6PRD1 2367 aa15.71■□□□□ 0.11
SMIM11A-203ENST00000399299 E2F8A0AVK6 867 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 BIN1O00499 593 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 P4HA2O15460 535 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 TLR5O60602 858 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 GNA14O95837 355 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 TBXAS1P24557 533 aaPredicted RBP15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 HOXA6P31267 233 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 GALK1P51570 392 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 KIF11P52732 1056 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 MARSP56192 900 aaKnown RBP15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 ARHGAP17Q68EM7 881 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 CD101Q93033 1021 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms