RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 HTRA3P83110 453 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 CAP1Q01518 475 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 SP3Q02447 781 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 FBXO47Q5MNV8 452 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 SYCP2LQ5T4T6 812 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 DRICH1Q6PGQ1 229 aaPredicted RBP12.31□□□□□ -0.44
COL25A1-202ENST00000399127 BBS12Q6ZW61 710 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 ZCCHC9Q8N567 271 aaKnown RBP12.31□□□□□ -0.44
COL25A1-202ENST00000399127 BBOF1Q8ND07 529 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 NKD2Q969F2 451 aaPredicted RBP12.31□□□□□ -0.44
COL25A1-202ENST00000399127 PAIP2Q9BPZ3 127 aaKnown RBP12.31□□□□□ -0.44
COL25A1-202ENST00000399127 CNPY3Q9BT09 278 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 CPSF2Q9P2I0 782 aaKnown RBP12.31□□□□□ -0.44
COL25A1-202ENST00000399127 HESX1Q9UBX0 185 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 KIAA1257Q9ULG3 409 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 TPX2Q9ULW0 747 aaKnown RBP12.31□□□□□ -0.44
COL25A1-202ENST00000399127 C17orf102A2RUQ5 167 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 HAS3O00219 553 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 PAPSS1O43252 624 aaPredicted RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 AP1G2O75843 785 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 PGK1P00558 417 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 ELNP15502 786 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 TFE3P19532 575 aaPredicted RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 IBSPP21815 317 aaPredicted RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 IFNAR2P48551 515 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 CDC42EP1Q00587 391 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 QPCTQ16769 361 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 CCDC14Q49A88 953 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 UBXN11Q5T124 520 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 TWF2Q6IBS0 349 aaKnown RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 CYP4V2Q6ZWL3 525 aaPredicted RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 EXOC3L1Q86VI1 746 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 ZC3H18Q86VM9 953 aaKnown RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 UNC45BQ8IWX7 931 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 CMASQ8NFW8 434 aaPredicted RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 MGARPQ8TDB4 240 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 LRRN4Q8WUT4 740 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 KBTBD7Q8WVZ9 684 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 ZFP42Q96MM3 310 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 TMEM109Q9BVC6 243 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 SPATS2LQ9NUQ6 558 aaKnown RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 UBQLN1Q9UMX0 589 aaKnown RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 DRG1Q9Y295 367 aaKnown RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 DERAQ9Y315 318 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 IPPQ9Y573 584 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 MEIS3P2A8K0S8 358 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 PRPSAP2O60256 369 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 FAM107AO95990 144 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 PKDCCQ504Y2 493 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 GNASQ5JWF2 1037 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 OLFML1Q6UWY5 402 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 CYP4X1Q8N118 509 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 TTC39CQ8N584 583 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 LRRC52Q8N7C0 313 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 FAM71DQ8N9W8 422 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 SPATA18Q8TC71 538 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 FAM172AQ8WUF8 416 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 RSAD2Q8WXG1 361 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 ARHGEF2Q92974 986 aaKnown RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 MRRFQ96E11 262 aaKnown RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 CNOT10Q9H9A5 744 aaKnown RBP12.3□□□□□ -0.44
COL25A1-202ENST00000399127 MLXIPLQ9NP71 852 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 RNF186Q9NXI6 227 aa12.3□□□□□ -0.44
COL25A1-202ENST00000399127 CHUKO15111 745 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 CTSHP09668 335 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 LCP1P13796 627 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 GNL1P36915 607 aaPredicted RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 EIF3EP60228 445 aaKnown RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 PURAQ00577 322 aaKnown RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 LRRC14Q15048 493 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 RNASEH2BQ5TBB1 312 aaKnown RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 ANKRD22Q5VYY1 191 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 ZBED8Q8IZ13 594 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 SMG8Q8ND04 991 aaKnown RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 ARMC2Q8NEN0 867 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 SLC35F5Q8WV83 523 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 XPO6Q96QU8 1125 aaKnown RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 ADAM33Q9BZ11 813 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 RALGAPA2Q2PPJ7 1873 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 PIRO00625 290 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 PIAS1O75925 651 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 RBP3P10745 1247 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 CTCFP49711 727 aaPredicted RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 APLP1P51693 650 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 ATXN1P54253 815 aaKnown RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 SLC6A3Q01959 620 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 TAZQ16635 292 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 CA9Q16790 459 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 MFSD5Q6N075 450 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 C1orf228Q6PIY5 440 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 CXCL17Q6UXB2 119 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 ANKMY2Q8IV38 441 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 CD99L2Q8TCZ2 262 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 CCHCR1Q8TD31 782 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 SLC2A14Q8TDB8 520 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 KHSRPQ92945 711 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 PRMT1Q99873 361 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms