RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 APPL2Q8NEU8 664 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 DYDC1Q8WWB3 177 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 DNAJB3Q8WWF6 145 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CPT1BQ92523 772 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 FAF2Q96CS3 445 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CDHR5Q9HBB8 845 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PAK5Q9P286 719 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 GTF2IRD1Q9UHL9 959 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SMG5Q9UPR3 1016 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PIN4Q9Y237 131 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 GINS2Q9Y248 185 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 LRPAP1P30533 357 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 DYNLT1P63172 113 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PDIA2Q13087 525 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 KLHL38Q2WGJ6 581 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 VSTM1Q6UX27 236 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CCDC13Q8IYE1 715 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 HACE1Q8IYU2 909 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PYROXD1Q8WU10 500 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CKAP2Q8WWK9 683 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 GRAMD1AQ96CP6 724 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 APBA2Q99767 749 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PRMT1Q99873 361 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 KDM4CQ9H3R0 1056 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SLC38A7Q9NVC3 462 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TUBGCP4Q9UGJ1 667 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 BCLAF3A2AJT9 711 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 APOL1O14791 398 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CHADO15335 359 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PRPF4O43172 522 aaKnown RBP eCLIP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PAPSS1O43252 624 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 HUS1O60921 280 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 GHRP10912 638 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ETS1P14921 441 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 WARSP23381 471 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PDE4CQ08493 712 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 IFT88Q13099 833 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 LACTB2Q53H82 288 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 EFHC2Q5JST6 749 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SLC9A4Q6AI14 798 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CYP4F22Q6NT55 531 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 DARS2Q6PI48 645 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 BZW1Q7L1Q6 419 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 STRADAQ7RTN6 431 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ZBED8Q8IZ13 594 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 KHSRPQ92945 711 aaKnown RBP eCLIP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PEBP4Q96S96 227 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 NXF3Q9H4D5 531 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 DNAJC17Q9NVM6 304 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 RCOR3Q9P2K3 495 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CPA4Q9UI42 421 aa18.49■□□□□ 0.55
HLA-DQB1-204ENST00000399084 RASA4BC9J798 803 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 RASA4O43374 803 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CD48P09326 243 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 GEMIN4P57678 1058 aaKnown RBP18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 RNASELQ05823 741 aaKnown RBP18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TMEM62Q0P6H9 643 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TAF1CQ15572 869 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 UBXN11Q5T124 520 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 C17orf99Q6UX52 265 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TRABD2AQ86V40 505 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 FAM172AQ8WUF8 416 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PWWP2AQ96N64 755 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 C11orf84Q9BUA3 381 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 VPS37BQ9H9H4 285 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 KCNK9Q9NPC2 374 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CHST12Q9NRB3 414 aa18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PSMC3IPQ9P2W1 217 aaPredicted RBP18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PDCD11Q14690 1871 aaKnown RBP18.48■□□□□ 0.55
HLA-DQB1-204ENST00000399084 FAM47DPA6NHR8 397 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PAX3P23760 479 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 MAGEA6P43360 314 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 BCAR1P56945 870 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 IL9RQ01113 521 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 DPYSL2Q16555 572 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ANKRD20A8PQ5CZ79 823 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TRNP1Q6NT89 227 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 RSPH3Q86UC2 560 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 UNC45BQ8IWX7 931 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PLD5Q8N7P1 536 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 C7orf31Q8N865 590 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 KBTBD7Q8WVZ9 684 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 C18orf25Q96B23 403 aaPredicted RBP18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ALKBH8Q96BT7 664 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 MAGEB18Q96M61 343 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 HNRNPABQ99729 332 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PCDH18Q9HCL0 1135 aa18.47■□□□□ 0.55
HLA-DQB1-204ENST00000399084 M0QZ92 97 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 XPO1O14980 1071 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 DUSP11O75319 330 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 MYL3P08590 195 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 VIMP08670 466 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 AKR1A1P14550 325 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 RGS7P49802 495 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 HUNKP57058 714 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SLC20A2Q08357 652 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 FSCN1Q16658 493 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 QPCTQ16769 361 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CCDC38Q502W7 563 aa18.46■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PRAMEF19Q5SWL8 479 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms