RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 ZBED1O96006 694 aa17.49■□□□□ 0.39
CDH23-204ENST00000398792 GPD1P21695 349 aa17.49■□□□□ 0.39
CDH23-204ENST00000398792 PSMA2P25787 234 aa17.49■□□□□ 0.39
CDH23-204ENST00000398792 RNASE9P60153 205 aaKnown RBP17.49■□□□□ 0.39
CDH23-204ENST00000398792 DUSP4Q13115 394 aa17.49■□□□□ 0.39
CDH23-204ENST00000398792 PIGHQ14442 188 aaPredicted RBP17.49■□□□□ 0.39
CDH23-204ENST00000398792 RPS6KA1Q15418 735 aa17.49■□□□□ 0.39
CDH23-204ENST00000398792 DDR2Q16832 855 aa17.49■□□□□ 0.39
CDH23-204ENST00000398792 BHLHA9Q7RTU4 235 aa17.49■□□□□ 0.39
CDH23-204ENST00000398792 ZNF461Q8TAF7 563 aa17.49■□□□□ 0.39
CDH23-204ENST00000398792 NDRG1Q92597 394 aaKnown RBP17.49■□□□□ 0.39
CDH23-204ENST00000398792 CD101Q93033 1021 aa17.49■□□□□ 0.39
CDH23-204ENST00000398792 ALG13Q9NP73 1137 aaKnown RBP17.49■□□□□ 0.39
CDH23-204ENST00000398792 YBX2Q9Y2T7 364 aaKnown RBP17.49■□□□□ 0.39
CDH23-204ENST00000398792 USP3Q9Y6I4 520 aa17.49■□□□□ 0.39
CDH23-204ENST00000398792 PLXNA3P51805 1871 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 MIF4GDA9UHW6 222 aaKnown RBP17.48■□□□□ 0.39
CDH23-204ENST00000398792 DPYSL4O14531 572 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 TEX28O15482 410 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 DAB1O75553 588 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 SOAT2O75908 522 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 RB1P06400 928 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 GLI1P08151 1106 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 USP17L7P0C7H9 530 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 DNA2P51530 1060 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 ZNF143P52747 638 aaPredicted RBP17.48■□□□□ 0.39
CDH23-204ENST00000398792 UBE3AQ05086 875 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 SDHAF4Q5VUM1 108 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 SCAMP5Q8TAC9 235 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 SPPL3Q8TCT6 385 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 UBE2Q2Q8WVN8 375 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 RXFP2Q8WXD0 754 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 IRGQQ8WZA9 623 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 SAMD11Q96NU1 681 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 TCF25Q9BQ70 676 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 C11orf84Q9BUA3 381 aaPredicted RBP17.48■□□□□ 0.39
CDH23-204ENST00000398792 HSFX1Q9UBD0 423 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 MTUS1Q9ULD2 1270 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 SLC27A5Q9Y2P5 690 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 SAR1BQ9Y6B6 198 aa17.48■□□□□ 0.39
CDH23-204ENST00000398792 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.47■□□□□ 0.39
CDH23-204ENST00000398792 DDX3YO15523 660 aaKnown RBP17.47■□□□□ 0.39
CDH23-204ENST00000398792 ATF2P15336 505 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 PDGFRAP16234 1089 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 CA8P35219 290 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 CTNNA1P35221 906 aaKnown RBP17.47■□□□□ 0.39
CDH23-204ENST00000398792 RPL10AP62906 217 aaKnown RBP17.47■□□□□ 0.39
CDH23-204ENST00000398792 DAB2IPQ5VWQ8 1189 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 PM20D1Q6GTS8 502 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 TMC7Q7Z402 723 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 STKLD1Q8NE28 680 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 POF1BQ8WVV4 589 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 FAM149B1Q96BN6 582 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 SPATA17Q96L03 361 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 TGS1Q96RS0 853 aaKnown RBP17.47■□□□□ 0.39
CDH23-204ENST00000398792 OSBPL9Q96SU4 736 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 PSMB7Q99436 277 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 ENTPD7Q9NQZ7 604 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 TLR9Q9NR96 1032 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 USTQ9Y2C2 406 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 MRFAP1Q9Y605 127 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 IRAK3Q9Y616 596 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 YJEFN3A6XGL0 299 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 E7ENQ6 273 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 CNPP09543 421 aaKnown RBP17.47■□□□□ 0.39
CDH23-204ENST00000398792 PRLRP16471 622 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 TCP1P17987 556 aaKnown RBP17.47■□□□□ 0.39
CDH23-204ENST00000398792 ATF6P18850 670 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 DNAJB1P25685 340 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 CTNNA2P26232 953 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 SDC4P31431 198 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 PBX2P40425 430 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 MARCKSL1P49006 195 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 ERVFC1P60507 584 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 YWHAZP63104 245 aaKnown RBP17.47■□□□□ 0.39
CDH23-204ENST00000398792 IFRD2Q12894 506 aaPredicted RBP17.47■□□□□ 0.39
CDH23-204ENST00000398792 HFE2Q6ZVN8 426 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 NUP93Q8N1F7 819 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 CFAP57Q96MR6 1250 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 SLC2A13Q96QE2 648 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 CNPY3Q9BT09 278 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 PBX4Q9BYU1 374 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 L2HGDHQ9H9P8 463 aa17.47■□□□□ 0.39
CDH23-204ENST00000398792 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.46■□□□□ 0.39
CDH23-204ENST00000398792 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.46■□□□□ 0.39
CDH23-204ENST00000398792 CCDC66A2RUB6 948 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 SRGAP2O75044 1071 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 LRCH4O75427 683 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 SEC24AO95486 1093 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 PTPN9P43378 593 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 TUFMP49411 452 aaKnown RBP17.46■□□□□ 0.39
CDH23-204ENST00000398792 ERVK-21P61565 698 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 SMC1AQ14683 1233 aaKnown RBP17.46■□□□□ 0.39
CDH23-204ENST00000398792 ACAP1Q15027 740 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 CCDC14Q49A88 953 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 PLPP4Q5VZY2 271 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 DENND5BQ6ZUT9 1274 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 KRT35Q92764 455 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 CEP295NLQ96MC4 621 aa17.46■□□□□ 0.39
CDH23-204ENST00000398792 POPDC2Q9HBU9 364 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms