RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 B3GNT5Q9BYG0 378 aa26.94■■□□□ 1.9
SHARPIN-202ENST00000398712 CNOT10Q9H9A5 744 aaKnown RBP26.94■■□□□ 1.9
SHARPIN-202ENST00000398712 PRDM4Q9UKN5 801 aa26.94■■□□□ 1.9
SHARPIN-202ENST00000398712 GIT1Q9Y2X7 761 aa26.94■■□□□ 1.9
SHARPIN-202ENST00000398712 MCF2LO15068 1137 aa26.93■■□□□ 1.9
SHARPIN-202ENST00000398712 THP07101 528 aa26.93■■□□□ 1.9
SHARPIN-202ENST00000398712 ETS1P14921 441 aa26.93■■□□□ 1.9
SHARPIN-202ENST00000398712 MLH1P40692 756 aa26.93■■□□□ 1.9
SHARPIN-202ENST00000398712 DPYSL3Q14195 570 aa26.93■■□□□ 1.9
SHARPIN-202ENST00000398712 SCYL2Q6P3W7 929 aa26.93■■□□□ 1.9
SHARPIN-202ENST00000398712 RSAD2Q8WXG1 361 aa26.93■■□□□ 1.9
SHARPIN-202ENST00000398712 SAE1Q9UBE0 346 aaPredicted RBP26.93■■□□□ 1.9
SHARPIN-202ENST00000398712 SLC12A6Q9UHW9 1150 aa26.93■■□□□ 1.9
SHARPIN-202ENST00000398712 XPO1O14980 1071 aaKnown RBP26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 IFNB1P01574 187 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 LCP1P13796 627 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 KCNA10Q16322 511 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 MFSD5Q6N075 450 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 KLHDC9Q8NEP7 349 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 DNAJC17Q9NVM6 304 aaKnown RBP26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 NINJ2Q9NZG7 142 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 SHOC2Q9UQ13 582 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 SMIM23A6NLE4 172 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 SRRM3A6NNA2 597 aaPredicted RBP26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 CST5P28325 142 aaPredicted RBP26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 LSP1P33241 339 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 EIF3EP60228 445 aaKnown RBP26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 KYNUQ16719 465 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 RAB6CQ53S08 254 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 CYP4F22Q6NT55 531 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 EPS8L3Q8TE67 593 aaKnown RBP26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 RBM15Q96T37 977 aaKnown RBP eCLIP26.92■■□□□ 1.96e-6■□□□□ 8.4
SHARPIN-202ENST00000398712 GAD1Q99259 594 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 RAB6CQ9H0N0 254 aa26.92■■□□□ 1.9
SHARPIN-202ENST00000398712 DCDC2CA8MYV0 355 aa26.91■■□□□ 1.9
SHARPIN-202ENST00000398712 MDM4O15151 490 aa26.91■■□□□ 1.9
SHARPIN-202ENST00000398712 PTPN1P18031 435 aaKnown RBP26.91■■□□□ 1.9
SHARPIN-202ENST00000398712 THPOP40225 353 aa26.91■■□□□ 1.9
SHARPIN-202ENST00000398712 PTGISQ16647 500 aa26.91■■□□□ 1.9
SHARPIN-202ENST00000398712 RNASEH2BQ5TBB1 312 aaKnown RBP26.91■■□□□ 1.9
SHARPIN-202ENST00000398712 PCSK9Q8NBP7 692 aaKnown RBP26.91■■□□□ 1.9
SHARPIN-202ENST00000398712 GSTCDQ8NEC7 633 aa26.91■■□□□ 1.9
SHARPIN-202ENST00000398712 SERPINB12Q96P63 405 aa26.91■■□□□ 1.9
SHARPIN-202ENST00000398712 DUSP16Q9BY84 665 aa26.91■■□□□ 1.9
SHARPIN-202ENST00000398712 MEIS3P2A8K0S8 358 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 GABRDO14764 452 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 PRKAR2AP13861 404 aaKnown RBP26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 CCND3P30281 292 aaPredicted RBP26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 RAB27AP51159 221 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 MMRN1Q13201 1228 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 EFHC1Q5JVL4 640 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 WSCD1Q658N2 575 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 MRPL10Q7Z7H8 261 aaKnown RBP26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 TMEM86AQ8N2M4 240 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 SPATA18Q8TC71 538 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 BCAS4Q8TDM0 211 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 PWWP2AQ96N64 755 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 RNF157Q96PX1 679 aa26.9■■□□□ 1.9
SHARPIN-202ENST00000398712 ZNF487B1APH4 448 aa26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 MYCNP04198 464 aaPredicted RBP26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 PECAM1P16284 738 aaPredicted RBP26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 TKTP29401 623 aaKnown RBP26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 MAGEA4P43358 317 aa26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 NOGQ13253 232 aa26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 NOMO1Q15155 1222 aa26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 CLEC4CQ8WTT0 213 aa26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 CENPIQ92674 756 aaPredicted RBP26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 P3H4Q92791 437 aa26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 SENP8Q96LD8 212 aa26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 TTC25Q96NG3 672 aa26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 SNRNP25Q9BV90 132 aaKnown RBP26.89■■□□□ 1.9
SHARPIN-202ENST00000398712 ARL5CA6NH57 179 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 TCEA3O75764 348 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 RBP3P10745 1247 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 LHX1P48742 406 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 HDAC4P56524 1084 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 AUHQ13825 339 aaKnown RBP26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 CCSAPQ6IQ19 270 aaPredicted RBP26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 FUKQ8N0W3 1084 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 LPPQ93052 612 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 CCDC77Q9BR77 488 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 C11orf84Q9BUA3 381 aaPredicted RBP26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 ZMYND15Q9H091 742 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 EPN3Q9H201 632 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 AGO3Q9H9G7 860 aaKnown RBP26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 PCDH18Q9HCL0 1135 aa26.89■■□□□ 1.89
SHARPIN-202ENST00000398712 ABHD2P08910 425 aa26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 TGM2P21980 687 aa26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 ATP5DP30049 168 aa26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 RPL9P32969 192 aaKnown RBP26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 SLCO1A2P46721 670 aa26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 ROR1Q01973 937 aa26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 SP3Q02447 781 aa26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 TNFAIP8L3Q5GJ75 292 aa26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 ZNF670Q9BS34 389 aa26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 PADI3Q9ULW8 664 aa26.88■■□□□ 1.89
SHARPIN-202ENST00000398712 SMAPO00193 183 aa26.87■■□□□ 1.89
SHARPIN-202ENST00000398712 ATP2C2O75185 946 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms