RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 MTSS1O43312 755 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 H2AFYO75367 372 aaKnown RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 SLC1A6P48664 564 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 PPM1FP49593 454 aaPredicted RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 ASTE1Q2TB18 679 aaPredicted RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 AASDHQ4L235 1098 aaPredicted RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 ARSHQ5FYA8 562 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 N4BP2L1Q5TBK1 243 aaPredicted RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 IER5Q5VY09 327 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 FRA10AC1Q70Z53 315 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.44□□□□□ -0.58
HPS4-202ENST00000398145 SGF29Q96ES7 293 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 IFT43Q96FT9 208 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 HPDLQ96IR7 371 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 ELMO2Q96JJ3 720 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 SEPT3Q9UH03 358 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 DRG1Q9Y295 367 aaKnown RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 FAM237BA0A1B0GVD1 139 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 SLCO1B7G3V0H7 640 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 TFE3P19532 575 aaPredicted RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 NAMPTP43490 491 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 GCLCP48506 637 aaPredicted RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 TRPC1P48995 793 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 NUP107P57740 925 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 ZBTB49Q6ZSB9 765 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 NET1Q7Z628 596 aaPredicted RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 ZDHHC15Q96MV8 337 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 NR1H4Q96RI1 486 aaPredicted RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 PLEKHA5Q9HAU0 1116 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 NMRK1Q9NWW6 199 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 ROBO3Q96MS0 1386 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 EEF2KO00418 725 aaKnown RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 LIASO43766 372 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 IL1R1P14778 569 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 GSCP56915 257 aaPredicted RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 MYL6P60660 151 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 CAPRIN1Q14444 709 aaKnown RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 DENND5BQ6ZUT9 1274 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 ZNF555Q8NEP9 628 aa11.44□□□□□ -0.58
HPS4-202ENST00000398145 RIMS1Q86UR5 1692 aaKnown RBP11.44□□□□□ -0.58
HPS4-202ENST00000398145 F8VP50 259 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 M0R3G1 203 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 DCXO43602 365 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 ALBP02768 609 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 HMGCS2P54868 508 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 TRIM16LQ309B1 348 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 NAPEPLDQ6IQ20 393 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 ZFP1Q6P2D0 407 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 MARK2Q7KZI7 788 aaKnown RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 LPCAT2Q7L5N7 544 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 KDELC2Q7Z4H8 507 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 CLNKQ7Z7G1 428 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 KIAA2013Q8IYS2 634 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 CCDC33Q8N5R6 958 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 RMDN2Q96LZ7 410 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 FAM193BQ96PV7 902 aaPredicted RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 GCNAQ96QF7 691 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 PRPF18Q99633 342 aaKnown RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 LRRC40Q9H9A6 602 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 IL1RL2Q9HB29 575 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 DMAP1Q9NPF5 467 aaPredicted RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 TSC22D4Q9Y3Q8 395 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 NR2E1Q9Y466 385 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 UBA6A0AVT1 1052 aaPredicted RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 DDTLA6NHG4 134 aaPredicted RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 DFFAO00273 331 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 KCNA2P16389 499 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 KCNA4P22459 653 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 PPARGP37231 505 aaPredicted RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 CCNHP51946 323 aaPredicted RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 TTLL4Q14679 1199 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 C6orf10Q5SRN2 563 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 ZCCHC23Q6ZST2 131 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 SEPT12Q8IYM1 358 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 CDC26Q8NHZ8 85 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 PIWIL2Q8TC59 973 aaKnown RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 SPIRE2Q8WWL2 714 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 ULK4Q96C45 1275 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 DCPSQ96C86 337 aaKnown RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 COMMD3-BMI1R4GMX3 469 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 TBC1D12O60347 775 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 GJB6O95452 261 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 ITGB3P05106 788 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 CYP3A4P08684 503 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 ETS1P14921 441 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 PSMA4P25789 261 aaKnown RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 MGAT5Q09328 741 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 DCAF6Q58WW2 860 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 DENND1BQ6P3S1 775 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 SLFN11Q7Z7L1 901 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 STKLD1Q8NE28 680 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 RXFP2Q8WXD0 754 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 WNK4Q96J92 1243 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 DDX50Q9BQ39 737 aaKnown RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 ASPSCR1Q9BZE9 553 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 ACSS3Q9H6R3 686 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 FBXO6Q9NRD1 293 aaPredicted RBP11.43□□□□□ -0.58
HPS4-202ENST00000398145 GPATCH2LQ9NWQ4 482 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 TMX2Q9Y320 296 aa11.43□□□□□ -0.58
HPS4-202ENST00000398145 SPATA31A1Q5TZJ5 1347 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms