RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 C15orf41Q9Y2V0 281 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 F8VP50 259 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 FCHO1O14526 889 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 AUHQ13825 339 aaKnown RBP11.15□□□□□ -0.62
CCDC40-204ENST00000397545 C2orf69Q8N8R5 385 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 SYTL5Q8TDW5 730 aaPredicted RBP11.15□□□□□ -0.62
CCDC40-204ENST00000397545 PDCD2LQ9BRP1 358 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 ASCC2Q9H1I8 757 aaPredicted RBP11.15□□□□□ -0.62
CCDC40-204ENST00000397545 MYLK2Q9H1R3 596 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 GANQ9H2C0 597 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 BCAS3Q9H6U6 928 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 RHBDL2Q9NX52 303 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 DTNAQ9Y4J8 743 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 MRPL42Q9Y6G3 142 aaKnown RBP11.15□□□□□ -0.62
CCDC40-204ENST00000397545 MEIS2O14770 477 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 ATP9AO75110 1047 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 ZNF235Q14590 738 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 QPCTQ16769 361 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 IER5Q5VY09 327 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 SLC26A11Q86WA9 606 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 KCTD17Q8N5Z5 321 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 EPS8L1Q8TE68 723 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 FAM172AQ8WUF8 416 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 NMD3Q96D46 503 aaKnown RBP11.15□□□□□ -0.62
CCDC40-204ENST00000397545 CEP19Q96LK0 163 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 USP18Q9UMW8 372 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 PLIN4Q96Q06 1357 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 ANKRD63C9JTQ0 380 aa11.15□□□□□ -0.63
CCDC40-204ENST00000397545 GHRP10912 638 aa11.15□□□□□ -0.63
CCDC40-204ENST00000397545 ARHGDIAP52565 204 aa11.15□□□□□ -0.63
CCDC40-204ENST00000397545 VCPP55072 806 aaKnown RBP11.15□□□□□ -0.63
CCDC40-204ENST00000397545 NME5P56597 212 aa11.15□□□□□ -0.63
CCDC40-204ENST00000397545 SNRPFP62306 86 aaKnown RBP11.15□□□□□ -0.63
CCDC40-204ENST00000397545 RRP1BQ14684 758 aaKnown RBP11.15□□□□□ -0.63
CCDC40-204ENST00000397545 PDK1Q15118 436 aa11.15□□□□□ -0.63
CCDC40-204ENST00000397545 MAPRE2Q15555 327 aa11.15□□□□□ -0.63
CCDC40-204ENST00000397545 SIAH1Q8IUQ4 282 aa11.15□□□□□ -0.63
CCDC40-204ENST00000397545 PBXIP1Q96AQ6 731 aa11.15□□□□□ -0.63
CCDC40-204ENST00000397545 GMCL1Q96IK5 515 aa11.15□□□□□ -0.63
CCDC40-204ENST00000397545 P2RX7Q99572 595 aaKnown RBP11.15□□□□□ -0.63
CCDC40-204ENST00000397545 CHST12Q9NRB3 414 aa11.15□□□□□ -0.63
CCDC40-204ENST00000397545 MAGEA13PA6NCF6 341 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 SYNDIG1LA6NDD5 238 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 M0QYT0 321 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 MAFGO15525 162 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 TLR2O60603 784 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 NCAM1P13591 858 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 PLOD1Q02809 727 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-204ENST00000397545 ERMARDQ5T6L9 678 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 CES3Q6UWW8 571 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 IRF2BP2Q7Z5L9 587 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 CLEC4FQ8N1N0 589 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 TMC2Q8TDI7 906 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 DACH2Q96NX9 599 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 RUBCNLQ9H714 662 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 C17orf75Q9HAS0 396 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 TMX2Q9Y320 296 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 GRIN3BO60391 1043 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 GARTP22102 1010 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 KCNA4P22459 653 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 MAP4P27816 1152 aaKnown RBP11.14□□□□□ -0.63
CCDC40-204ENST00000397545 NOVP48745 357 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 CLK2P49760 499 aaKnown RBP11.14□□□□□ -0.63
CCDC40-204ENST00000397545 CXCL9Q07325 125 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 CNGA2Q16280 664 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 CNPY4Q8N129 248 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 EFHBQ8N7U6 833 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 ZNF75CPQ92670 426 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-204ENST00000397545 ILKAPQ9H0C8 392 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-204ENST00000397545 KCTD10Q9H3F6 313 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 CCDC134Q9H6E4 229 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 GEMIN8Q9NWZ8 242 aaKnown RBP11.14□□□□□ -0.63
CCDC40-204ENST00000397545 MEI4A8MW99 385 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 KBTBD13C9JR72 458 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 DNALI1O14645 258 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-204ENST00000397545 CALB2P22676 271 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 ATICP31939 592 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 PRKCIP41743 596 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 DSG1Q02413 1049 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 NFIL3Q16649 462 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 UGP2Q16851 508 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 KIZQ2M2Z5 673 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 EP400NLQ6ZTU2 488 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 PPHLN1Q8NEY8 458 aaKnown RBP11.14□□□□□ -0.63
CCDC40-204ENST00000397545 SNX19Q92543 992 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 DDIT4Q9NX09 232 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 DONSONQ9NYP3 566 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 CDYLQ9Y232 598 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 DLEC1Q9Y238 1755 aa11.14□□□□□ -0.63
CCDC40-204ENST00000397545 ARHGEF37A1IGU5 675 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 PDE5AO76074 875 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 ACO1P21399 889 aaKnown RBP11.13□□□□□ -0.63
CCDC40-204ENST00000397545 GNL1P36915 607 aaPredicted RBP11.13□□□□□ -0.63
CCDC40-204ENST00000397545 RFC5P40937 340 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 FAAP100Q0VG06 881 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 RBBP7Q16576 425 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 LLGL2Q6P1M3 1020 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 ATPAF2Q8N5M1 289 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 CATSPER1Q8NEC5 780 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 TFB1MQ8WVM0 346 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms