RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 C12orf40Q86WS4 652 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 ETFBKMTQ8IXQ9 262 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 FRMD1Q8N878 549 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 SCFD1Q8WVM8 642 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 RLN3Q8WXF3 142 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 PIGKQ92643 395 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 CCDC127Q96BQ5 260 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 OTUB2Q96DC9 234 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 INTS4Q96HW7 963 aaKnown RBP12.69□□□□□ -0.38
SYNE4-203ENST00000397428 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
SYNE4-203ENST00000397428 KCNK16Q96T55 309 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 CGRRF1Q99675 332 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 ZNF518BQ9C0D4 1074 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 VRTNQ9H8Y1 702 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 POLMQ9NP87 494 aaPredicted RBP12.69□□□□□ -0.38
SYNE4-203ENST00000397428 ARHGEF4Q9NR80 690 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 TMEM74BQ9NUR3 256 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 COMMD8Q9NX08 183 aa12.69□□□□□ -0.38
SYNE4-203ENST00000397428 MBD1Q9UIS9 605 aaPredicted RBP12.69□□□□□ -0.38
SYNE4-203ENST00000397428 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 FAM92AA1XBS5 289 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 CLDN5O00501 218 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 CLIC2O15247 247 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 MAP3K13O43283 966 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 COCHO43405 550 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 PPP6R2O75170 966 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 RTN3O95197 1032 aaPredicted RBP12.68□□□□□ -0.38
SYNE4-203ENST00000397428 ADH1CP00326 375 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 ZDHHC11BP0C7U3 371 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 DLATP10515 647 aaKnown RBP12.68□□□□□ -0.38
SYNE4-203ENST00000397428 MBL2P11226 248 aaPredicted RBP12.68□□□□□ -0.38
SYNE4-203ENST00000397428 TNNC1P63316 161 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 CLDN10P78369 228 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 GAD2Q05329 585 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 BYSLQ13895 437 aaKnown RBP12.68□□□□□ -0.38
SYNE4-203ENST00000397428 LY6G5CQ5SRR4 150 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 SYT12Q8IV01 421 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 C12orf56Q8IXR9 622 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 TMEFF1Q8IYR6 380 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 IQUBQ8NA54 791 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 XXYLT1Q8NBI6 393 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 B3GALNT2Q8NCR0 500 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 PDZD8Q8NEN9 1154 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 SCAMP5Q8TAC9 235 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 WHAMMQ8TF30 809 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
SYNE4-203ENST00000397428 TFIP11Q9UBB9 837 aaKnown RBP12.68□□□□□ -0.38
SYNE4-203ENST00000397428 HCN2Q9UL51 889 aa12.68□□□□□ -0.38
SYNE4-203ENST00000397428 A8MXQ7 604 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.67□□□□□ -0.38
SYNE4-203ENST00000397428 C1QTNF9BB2RNN3 333 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 SCAMP3O14828 347 aaKnown RBP12.67□□□□□ -0.38
SYNE4-203ENST00000397428 SPTLC2O15270 562 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 HOXC11O43248 304 aaPredicted RBP12.67□□□□□ -0.38
SYNE4-203ENST00000397428 C1QTNF9P0C862 333 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 ADH5P11766 374 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 PTGER3P43115 390 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 TUBP50607 506 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 CDH8P55286 799 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 LMAN2Q12907 356 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 BMT2Q1RMZ1 405 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 FAM26FQ5R3K3 315 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 HECTD3Q5T447 861 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 PEAR1Q5VY43 1037 aaPredicted RBP12.67□□□□□ -0.38
SYNE4-203ENST00000397428 SLC23A3Q6PIS1 610 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 TMEM25Q86YD3 366 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 SYAP1Q96A49 352 aaPredicted RBP12.67□□□□□ -0.38
SYNE4-203ENST00000397428 CGNQ9P2M7 1197 aaKnown RBP12.67□□□□□ -0.38
SYNE4-203ENST00000397428 NXF1Q9UBU9 619 aaKnown RBP12.67□□□□□ -0.38
SYNE4-203ENST00000397428 PILRBQ9UKJ0 227 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 STARD13Q9Y3M8 1113 aa12.67□□□□□ -0.38
SYNE4-203ENST00000397428 MYOFQ9NZM1 2061 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 PVALEFA0A1B0GWK0 134 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 UPK3BL1B0FP48 263 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 UPK3BL2E5RIL1 263 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 CUTAO60888 179 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 TULP3O75386 442 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 TOP3BO95985 862 aaKnown RBP12.66□□□□□ -0.38
SYNE4-203ENST00000397428 C4BPAP04003 597 aaKnown RBP12.66□□□□□ -0.38
SYNE4-203ENST00000397428 DPP6P42658 865 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 CYP2J2P51589 502 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 ASIC1P78348 528 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 ZNF252P-AS1Q0IIN9 211 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 FOXC1Q12948 553 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 TRPC3Q13507 836 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 STK38Q15208 465 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 TRIM61Q5EBN2 209 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 SHC4Q6S5L8 630 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 UNQ6494/PRO21346Q6UXR6 183 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 HTR3DQ70Z44 454 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 TTC30AQ86WT1 665 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 CRYBG2Q8N1P7 616 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 PLEKHO2Q8TD55 490 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 TMEM174Q8WUU8 243 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 FBXO32Q969P5 355 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 WBP2Q969T9 261 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 DHX58Q96C10 678 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 CCSER2Q9H7U1 834 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 CSNK1G1Q9HCP0 422 aa12.66□□□□□ -0.38
SYNE4-203ENST00000397428 SPHK2Q9NRA0 654 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms