RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SECISBP2LQ93073 1101 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 STK33Q9BYT3 514 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 RTN4Q9NQC3 1192 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 CHORDC1Q9UHD1 332 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 SCML2Q9UQR0 700 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 F8VZ95 297 aa22.33■■□□□ 1.17
TSPAN4-206ENST00000397408 TEX33O43247 280 aa22.33■■□□□ 1.17
TSPAN4-206ENST00000397408 PLA2G4AP47712 749 aa22.33■■□□□ 1.17
TSPAN4-206ENST00000397408 POLR2FP61218 127 aaKnown RBP22.33■■□□□ 1.17
TSPAN4-206ENST00000397408 DEPDC1BQ8WUY9 529 aa22.33■■□□□ 1.17
TSPAN4-206ENST00000397408 ZNF606Q8WXB4 792 aa22.33■■□□□ 1.17
TSPAN4-206ENST00000397408 USP13Q92995 863 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-206ENST00000397408 E2F7Q96AV8 911 aa22.33■■□□□ 1.17
TSPAN4-206ENST00000397408 CYP2S1Q96SQ9 504 aa22.33■■□□□ 1.17
TSPAN4-206ENST00000397408 TECTAO75443 2155 aa22.33■■□□□ 1.16
TSPAN4-206ENST00000397408 A0A1B0GTH6 734 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 USP17L7P0C7H9 530 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 ZDHHC11BP0C7U3 371 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 HDCP19113 662 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 PDE6CP51160 858 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 TKTL1P51854 596 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 PTK2Q05397 1052 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 RAB41Q5JT25 222 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 DENND1BQ6P3S1 775 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 LRRC4Q9HBW1 653 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 NLRC4Q9NPP4 1024 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 TLR8Q9NR97 1041 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 TDP1Q9NUW8 608 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 CCL26Q9Y258 94 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 DAAM1Q9Y4D1 1078 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 USP3Q9Y6I4 520 aa22.32■■□□□ 1.16
TSPAN4-206ENST00000397408 OAS1P00973 400 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 CFHP08603 1231 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 PFKLP17858 780 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 PSMC3P17980 439 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 CLCN1P35523 988 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 PGFP49763 221 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 RGS7P49802 495 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 GPC5P78333 572 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 FANCCQ00597 558 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 SIGLEC14Q08ET2 396 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 ADIGQ0VDE8 80 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 SNX30Q5VWJ9 437 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 CCDC186Q7Z3E2 898 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 SLC47A2Q86VL8 602 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 CELF5Q8N6W0 485 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 SLC35F5Q8WV83 523 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 NAP1L5Q96NT1 182 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 KIF9Q9HAQ2 790 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 OBP2AQ9NY56 170 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 OLFM2O95897 454 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 ZNF445P59923 1031 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 ZNF268Q14587 947 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 MEA1Q16626 185 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 HECTD3Q5T447 861 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 PMF1Q6P1K2 205 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 TRIM67Q6ZTA4 783 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 MFSD6LQ8IWD5 586 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 BPIFB1Q8TDL5 484 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 KCTD13Q8WZ19 329 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 LRRC3BQ96PB8 259 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 SPAG5Q96R06 1193 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 TRMT61BQ9BVS5 477 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 ULBP1Q9BZM6 244 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 NMUR1Q9HB89 426 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 SLC2A4RGQ9NR83 387 aa22.31■■□□□ 1.16
TSPAN4-206ENST00000397408 A0A1W2PQH9 124 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 GDI1P31150 447 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 GPD2P43304 727 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 TUBP50607 506 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 BPIFB4P59827 614 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 YAF2Q8IY57 180 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 SIX6OS1Q8N1H7 587 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 RNF214Q8ND24 703 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 TTC16Q8NEE8 873 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 RNF38Q9H0F5 515 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 CCSER2Q9H7U1 834 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 NAGPAQ9UK23 515 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 FBXL21Q9UKT6 434 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 ARHGAP26Q9UNA1 814 aa22.3■■□□□ 1.16
TSPAN4-206ENST00000397408 HELZP42694 1942 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 FAM86C2PA6NEL3 165 aa22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 COCHO43405 550 aa22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 ZBED1O96006 694 aa22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 LCP1P13796 627 aa22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 JAM2P57087 298 aa22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 FCHO2Q0JRZ9 810 aa22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 PASD1Q8IV76 773 aa22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 RIN3Q8TB24 985 aa22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 BRD9Q9H8M2 597 aa22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 OSER1Q9NX31 292 aa22.29■■□□□ 1.16
TSPAN4-206ENST00000397408 TMEM221A6NGB7 291 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 M0R296 226 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 PIK3R2O00459 728 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 TLR5O60602 858 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 GFPT2O94808 682 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 MBL2P11226 248 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 CYP11B1P15538 503 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 SLC7A9P82251 487 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 USP4Q13107 963 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms