RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 MIS12Q9H081 205 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 TUBGCP4Q9UGJ1 667 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 A0A1W2PPM1 405 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 C2CD4BA6NLJ0 364 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 MCF2LO15068 1137 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 ADCY6O43306 1168 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 NAIF1Q69YI7 327 aaPredicted RBP24.82■■□□□ 1.56
PABPN1-202ENST00000397276 FITM2Q8N6M3 262 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 C7orf31Q8N865 590 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 KLHL29Q96CT2 875 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 B3GNT5Q9BYG0 378 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 TRABDQ9H4I3 376 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 CFAP73A6NFT4 308 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 APOC4-APOC2K7ER74 178 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 TMEM63AO94886 807 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 APOC2P02655 101 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 WDR4P57081 412 aaKnown RBP24.82■■□□□ 1.56
PABPN1-202ENST00000397276 INCA1Q0VD86 236 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 LCLAT1Q6UWP7 414 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 C3orf62Q6ZUJ4 267 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 BZW1Q7L1Q6 419 aaKnown RBP24.82■■□□□ 1.56
PABPN1-202ENST00000397276 NAT8LQ8N9F0 302 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 SYT17Q9BSW7 474 aa24.82■■□□□ 1.56
PABPN1-202ENST00000397276 XPO7Q9UIA9 1087 aaKnown RBP24.82■■□□□ 1.56
PABPN1-202ENST00000397276 CLUHO75153 1309 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 FAM47DPA6NHR8 397 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 PRPSAP2O60256 369 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 MMP3P08254 477 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 TAZQ16635 292 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 GALNTL6Q49A17 601 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 ZC3H12AQ5D1E8 599 aaKnown RBP24.81■■□□□ 1.56
PABPN1-202ENST00000397276 PRAMEF19Q5SWL8 479 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 RMDN2Q96LZ7 410 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 OSMRQ99650 979 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 CNPY3Q9BT09 278 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 FOXN2P32314 431 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 YARSP54577 528 aaKnown RBP24.81■■□□□ 1.56
PABPN1-202ENST00000397276 CATSPER4Q7RTX7 472 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 GPR142Q7Z601 462 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 PCGF5Q86SE9 256 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 TTC30AQ86WT1 665 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 MAB21L3Q8N8X9 362 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 FBXO36Q8NEA4 188 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 HEY1Q9Y5J3 304 aa24.81■■□□□ 1.56
PABPN1-202ENST00000397276 HOXA11P31270 313 aaPredicted RBP24.8■■□□□ 1.56
PABPN1-202ENST00000397276 CCNHP51946 323 aaPredicted RBP24.8■■□□□ 1.56
PABPN1-202ENST00000397276 ARL4CP56559 192 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 CYP4V2Q6ZWL3 525 aaPredicted RBP24.8■■□□□ 1.56
PABPN1-202ENST00000397276 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.8■■□□□ 1.56
PABPN1-202ENST00000397276 SPOCK2Q92563 424 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 WDR83Q9BRX9 315 aaKnown RBP24.8■■□□□ 1.56
PABPN1-202ENST00000397276 RSAD1Q9HA92 442 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 NME7Q9Y5B8 376 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 UPP2O95045 317 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 AKAP5P24588 427 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 KRT81Q14533 505 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 CCDC142Q17RM4 750 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 CCDC14Q49A88 953 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 OR6B3Q8NGW1 331 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 MS4A4AQ96JQ5 239 aa24.8■■□□□ 1.56
PABPN1-202ENST00000397276 H7C0C1 242 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 ATP5OP48047 213 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 DPYSL3Q14195 570 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 RIBC1Q8N443 379 aaPredicted RBP24.79■■□□□ 1.56
PABPN1-202ENST00000397276 KCNV2Q8TDN2 545 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 BRI3BPQ8WY22 251 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 RPA3P35244 121 aaPredicted RBP24.79■■□□□ 1.56
PABPN1-202ENST00000397276 GRM5P41594 1212 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 GCLCP48506 637 aaPredicted RBP24.79■■□□□ 1.56
PABPN1-202ENST00000397276 BNIP1Q12981 228 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 PALM2Q8IXS6 379 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 MAML3Q96JK9 1138 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 MAGEB18Q96M61 343 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 SMC6Q96SB8 1091 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 DPEP3Q9H4B8 488 aa24.79■■□□□ 1.56
PABPN1-202ENST00000397276 RBM47A0AV96 593 aaKnown RBP24.78■■□□□ 1.56
PABPN1-202ENST00000397276 DYNC1LI2O43237 492 aaPredicted RBP24.78■■□□□ 1.56
PABPN1-202ENST00000397276 PDGFRBP09619 1106 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 ALADP13716 330 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 PCK1P35558 622 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 ROR1Q01973 937 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 MGAT5Q09328 741 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 ACVR2BQ13705 512 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 DGKDQ16760 1214 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 PPP1R21Q6ZMI0 780 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 SPATA21Q7Z572 469 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 SESTD1Q86VW0 696 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 FBF1Q8TES7 1133 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 EMID1Q96A84 441 aaPredicted RBP24.78■■□□□ 1.56
PABPN1-202ENST00000397276 LENG1Q96BZ8 264 aaPredicted RBP24.78■■□□□ 1.56
PABPN1-202ENST00000397276 SPDL1Q96EA4 605 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 GBA2Q9HCG7 927 aaPredicted RBP24.78■■□□□ 1.56
PABPN1-202ENST00000397276 NOP53Q9NZM5 478 aaKnown RBP24.78■■□□□ 1.56
PABPN1-202ENST00000397276 KLK14Q9P0G3 267 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 RABGEF1Q9UJ41 708 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 CHMP2BQ9UQN3 213 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 ACTL7BQ9Y614 415 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 COL1A2P08123 1366 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 SLC8A3P57103 927 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 ACAP1Q15027 740 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms