RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 Q6ZNB5 142 aa11.18□□□□□ -0.62
NUP98-205ENST00000397007 SPATA31D4Q6ZUB0 917 aa11.18□□□□□ -0.62
NUP98-205ENST00000397007 RBM23Q86U06 439 aaKnown RBP11.18□□□□□ -0.62
NUP98-205ENST00000397007 RSPRY1Q96DX4 576 aa11.18□□□□□ -0.62
NUP98-205ENST00000397007 HEXIM2Q96MH2 286 aaKnown RBP11.18□□□□□ -0.62
NUP98-205ENST00000397007 BTNL10A8MVZ5 291 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 RHOP08100 348 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 C7P10643 843 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 CCZ1BP86790 482 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 CCZ1P86791 482 aaPredicted RBP11.17□□□□□ -0.62
NUP98-205ENST00000397007 C1QBPQ07021 282 aaKnown RBP11.17□□□□□ -0.62
NUP98-205ENST00000397007 SLC26A9Q7LBE3 791 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 ZDHHC17Q8IUH5 632 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 CHP1Q99653 195 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.17□□□□□ -0.62
NUP98-205ENST00000397007 OBP2AQ9NY56 170 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 ABI2Q9NYB9 513 aaPredicted RBP11.17□□□□□ -0.62
NUP98-205ENST00000397007 TCF20Q9UGU0 1960 aaKnown RBP11.17□□□□□ -0.62
NUP98-205ENST00000397007 DPYSL4O14531 572 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 RTN3O95197 1032 aaPredicted RBP11.17□□□□□ -0.62
NUP98-205ENST00000397007 SLC34A2O95436 690 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 GLI1P08151 1106 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 CSH1P0DML2 217 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 CSH2P0DML3 217 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 MAP3K7CLP57077 242 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 SFMBT2Q5VUG0 894 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 NPAS3Q8IXF0 933 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 STKLD1Q8NE28 680 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 OR8K1Q8NGG5 319 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 TCEAL4Q96EI5 215 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 SLC39A13Q96H72 371 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 LRRC3BQ96PB8 259 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 CYP4F11Q9HBI6 524 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 KCND1Q9NSA2 647 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 ZFP37Q9Y6Q3 630 aaPredicted RBP11.17□□□□□ -0.62
NUP98-205ENST00000397007 MYO7AQ13402 2215 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 DDX6P26196 483 aaKnown RBP eCLIP11.17□□□□□ -0.62
NUP98-205ENST00000397007 MRE11P49959 708 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 NNTQ13423 1086 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 ACAD10Q6JQN1 1059 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 C12orf76Q8N812 135 aaPredicted RBP11.17□□□□□ -0.62
NUP98-205ENST00000397007 CLEC4CQ8WTT0 213 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 ATXN2LQ8WWM7 1075 aaKnown RBP11.17□□□□□ -0.62
NUP98-205ENST00000397007 HLA-CQ95604 372 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 PRKAG3Q9UGI9 489 aa11.17□□□□□ -0.62
NUP98-205ENST00000397007 A0A087X0T9 212 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 CYP1A2P05177 515 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 FAM228BP0C875 321 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 PTPN2P17706 415 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 TRIM21P19474 475 aaKnown RBP11.16□□□□□ -0.62
NUP98-205ENST00000397007 DENND5BQ6ZUT9 1274 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 ZNF683Q8IZ20 524 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 ITFG1Q8TB96 612 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 ZSWIM3Q96MP5 696 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 NECTIN4Q96NY8 510 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 ZMYM5Q9UJ78 669 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 NAGPAQ9UK23 515 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 I6L893 689 aaPredicted RBP11.16□□□□□ -0.62
NUP98-205ENST00000397007 CEBPBP17676 345 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 MRPS5P82675 430 aaKnown RBP11.16□□□□□ -0.62
NUP98-205ENST00000397007 GOLGA8FQ08AF8 430 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 GOLGA8DPQ0D2H9 430 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 SLC18A3Q16572 532 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 GAB4Q2WGN9 574 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 CNGA4Q8IV77 575 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 MCOLN2Q8IZK6 566 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 MYADMQ96S97 322 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 CCL16O15467 120 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 PJA2O43164 708 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 PDE6CP51160 858 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 CYP27A1Q02318 531 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 ZP2Q05996 745 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 RAPGEF1Q13905 1077 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 GSE1Q14687 1217 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 C5orf22Q49AR2 442 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 PPM1LQ5SGD2 360 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 LLGL2Q6P1M3 1020 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 HFE2Q6ZVN8 426 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 C1orf131Q8NDD1 294 aaKnown RBP11.16□□□□□ -0.62
NUP98-205ENST00000397007 UBA3Q8TBC4 463 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 PPP2R3CQ969Q6 453 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 KLF16Q9BXK1 252 aaPredicted RBP11.16□□□□□ -0.62
NUP98-205ENST00000397007 RNF38Q9H0F5 515 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 KCNF1Q9H3M0 494 aa11.16□□□□□ -0.62
NUP98-205ENST00000397007 USP34Q70CQ2 3546 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 AKR1B15C9JRZ8 316 aaPredicted RBP11.15□□□□□ -0.62
NUP98-205ENST00000397007 ADORA2BP29275 332 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 KRT9P35527 623 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 FCHO2Q0JRZ9 810 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 ZNF77Q15935 545 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 SDHAF4Q5VUM1 108 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 FAM183BPQ6ZVS7 135 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 ITIH5Q86UX2 942 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 FAM71BQ8TC56 605 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 ASB16Q96NS5 453 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 SLC46A2Q9BY10 475 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 GDE1Q9NZC3 331 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 INTUQ9ULD6 942 aa11.15□□□□□ -0.62
NUP98-205ENST00000397007 LUC7L2Q9Y383 392 aaKnown RBP11.15□□□□□ -0.62
NUP98-205ENST00000397007 E5RJQ4 531 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms