RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ACSF2Q96CM8 615 aaPredicted RBP13.9□□□□□ -0.18
TRIM40-207ENST00000396581 C7orf26Q96N11 449 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 NR1H4Q96RI1 486 aaPredicted RBP13.9□□□□□ -0.18
TRIM40-207ENST00000396581 PLA2G4CQ9UP65 541 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 C2CD2Q9Y426 696 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 TEX264Q9Y6I9 313 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 TCRBV9S1A1TA0A576 114 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 KLHL33A6NCF5 533 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 PIAS1O75925 651 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 RGS20O76081 388 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 ATG7O95352 703 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 PSAPP07602 524 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 KRT7P08729 469 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 MYL2P10916 166 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 BGNP21810 368 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 KDELR1P24390 212 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 SERPINB4P48594 390 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 RAB27AP51159 221 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 AP3M2P53677 418 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 ZBTB16Q05516 673 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 ZBTB41Q5SVQ8 909 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 MTHFD1LQ6UB35 978 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 TTC7BQ86TV6 843 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 IGDCC3Q8IVU1 814 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 PHC3Q8NDX5 983 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 STMN2Q93045 179 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 SLC10A4Q96EP9 437 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 FAM111AQ96PZ2 611 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 ZNF184Q99676 751 aaPredicted RBP13.89□□□□□ -0.19
TRIM40-207ENST00000396581 NMUR2Q9GZQ4 415 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 MKS1Q9NXB0 559 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 SAE1Q9UBE0 346 aaPredicted RBP13.89□□□□□ -0.19
TRIM40-207ENST00000396581 XPO7Q9UIA9 1087 aaKnown RBP13.89□□□□□ -0.19
TRIM40-207ENST00000396581 PEX10O60683 326 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 LRCH4O75427 683 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 ATP5BP06576 529 aaKnown RBP13.89□□□□□ -0.19
TRIM40-207ENST00000396581 IL1R2P27930 398 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 GJA5P36382 358 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 NAMPTP43490 491 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 ZNF200P98182 395 aaPredicted RBP13.89□□□□□ -0.19
TRIM40-207ENST00000396581 PRKCEQ02156 737 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 FAAP100Q0VG06 881 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 GRM1Q13255 1194 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 NBPF20Q3BBV1 942 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 BBS9Q3SYG4 887 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 GNPTABQ3T906 1256 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 RNF220Q5VTB9 566 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 FOXB2Q5VYV0 432 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 SWSAP1Q6NVH7 229 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 NET1Q7Z628 596 aaPredicted RBP13.89□□□□□ -0.19
TRIM40-207ENST00000396581 UNC45BQ8IWX7 931 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 KBTBD2Q8IY47 623 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 RSAD2Q8WXG1 361 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 ZBTB45Q96K62 511 aaPredicted RBP13.89□□□□□ -0.19
TRIM40-207ENST00000396581 CCDC28BQ9BUN5 200 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 FAM192AQ9GZU8 254 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 PIDD1Q9HB75 910 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 ALG13Q9NP73 1137 aaKnown RBP13.89□□□□□ -0.19
TRIM40-207ENST00000396581 PDP2Q9P2J9 529 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 ZNF180Q9UJW8 692 aa13.89□□□□□ -0.19
TRIM40-207ENST00000396581 A0A0G2JMZ2 1700 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 E5RJQ4 531 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 APOC4-APOC2K7ER74 178 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 MAP3K7O43318 606 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 CNMDO75829 334 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 APOC2P02655 101 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 PGM1P36871 562 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 CCNFP41002 786 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 ELK3P41970 407 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 SNAPC2Q13487 334 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 DPYSL3Q14195 570 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 KBTBD12Q3ZCT8 623 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 SCARA3Q6AZY7 606 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 GPAT2Q6NUI2 795 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 ABHD15Q6UXT9 468 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 CCDC60Q8IWA6 550 aaPredicted RBP13.88□□□□□ -0.19
TRIM40-207ENST00000396581 TRIM42Q8IWZ5 723 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 CMASQ8NFW8 434 aaPredicted RBP13.88□□□□□ -0.19
TRIM40-207ENST00000396581 CCDC110Q8TBZ0 833 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 APBB2Q92870 758 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 CDHR1Q96JP9 859 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 C10orf88Q9H8K7 445 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
TRIM40-207ENST00000396581 ANGPTL2Q9UKU9 493 aa13.88□□□□□ -0.19
TRIM40-207ENST00000396581 MYH9P35579 1960 aaKnown RBP13.88□□□□□ -0.19
TRIM40-207ENST00000396581 FAM237BA0A1B0GVD1 139 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 CST3P01034 146 aaPredicted RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 PYGBP11216 843 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 AMPD1P23109 780 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 BRD2P25440 801 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 RFC1P35251 1148 aaPredicted RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 PSMC4P43686 418 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 CACNA2D1P54289 1103 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 FKBP1BP68106 108 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 THOC5Q13769 683 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 KCNJ11Q14654 390 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 EMC2Q15006 297 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 TRMT5Q32P41 509 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 XKR3Q5GH77 459 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms