RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 GRSF1Q12849 480 aaKnown RBP eCLIP20.41■□□□□ 0.86
CDKN1B-202ENST00000396340 FBXO43Q4G163 708 aa20.41■□□□□ 0.86
CDKN1B-202ENST00000396340 SGO2Q562F6 1265 aa20.41■□□□□ 0.86
CDKN1B-202ENST00000396340 KLHDC10Q6PID8 442 aa20.41■□□□□ 0.86
CDKN1B-202ENST00000396340 CLEC20AQ6ZU45 233 aa20.41■□□□□ 0.86
CDKN1B-202ENST00000396340 ANKRD52Q8NB46 1076 aa20.41■□□□□ 0.86
CDKN1B-202ENST00000396340 SH3RF2Q8TEC5 729 aa20.41■□□□□ 0.86
CDKN1B-202ENST00000396340 WHAMMQ8TF30 809 aa20.41■□□□□ 0.86
CDKN1B-202ENST00000396340 RSPRY1Q96DX4 576 aa20.41■□□□□ 0.86
CDKN1B-202ENST00000396340 SPATA6Q9NWH7 488 aaPredicted RBP20.41■□□□□ 0.86
CDKN1B-202ENST00000396340 E2F8A0AVK6 867 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 GTPBP10A4D1E9 387 aaKnown RBP20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 C2orf78A6NCI8 922 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 PROB1E7EW31 1015 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 H0Y858 1186 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 ATG13O75143 517 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 TARSP26639 723 aaKnown RBP20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 ADORA2BP29275 332 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 NBL1P41271 181 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 CCR3P51677 355 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 BCAT1P54687 386 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 RAD23BP54727 409 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 IFRD2Q12894 506 aaPredicted RBP20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 PPM1KQ8N3J5 372 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 CYP2S1Q96SQ9 504 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 SMOQ99835 787 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 CHRDQ9H2X0 955 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 THAP9Q9H5L6 903 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 HMGXB4Q9UGU5 601 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 CCL26Q9Y258 94 aa20.4■□□□□ 0.86
CDKN1B-202ENST00000396340 ZDHHC11BP0C7U3 371 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 SETSIPP0DME0 302 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 MBL2P11226 248 aaPredicted RBP20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 RALAP11233 206 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 DRD1P21728 446 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 ATP5C1P36542 298 aaKnown RBP20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 CACNA2D1P54289 1103 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 STX17P56962 302 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 ZNF394Q53GI3 561 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 PPP1R26Q5T8A7 1209 aaPredicted RBP20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 NUDT18Q6ZVK8 323 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 CCDC186Q7Z3E2 898 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 SLC4A11Q8NBS3 891 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 EHBP1Q8NDI1 1231 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 TATDN2Q93075 761 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 LMBRD1Q9NUN5 540 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 GTSE1Q9NYZ3 720 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 CLIC5Q9NZA1 410 aa20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 NDRG2Q9UN36 371 aaKnown RBP20.39■□□□□ 0.85
CDKN1B-202ENST00000396340 PIEZO1Q92508 2521 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 CACNA1IQ9P0X4 2223 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 FANCMQ8IYD8 2048 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 TRDMT1O14717 391 aaKnown RBP20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 ACO1P21399 889 aaKnown RBP20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 ZMIZ2Q8NF64 920 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 SCAMP5Q8TAC9 235 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 LRRC3BQ96PB8 259 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 TWNKQ96RR1 684 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 SMG9Q9H0W8 520 aaKnown RBP20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 EBF3Q9H4W6 596 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 ECT2Q9H8V3 914 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 LMAN1LQ9HAT1 526 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 CYLDQ9NQC7 956 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 TMEM30AQ9NV96 361 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 CHORDC1Q9UHD1 332 aaPredicted RBP20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 SH3BP1Q9Y3L3 701 aa20.38■□□□□ 0.85
CDKN1B-202ENST00000396340 LEFTY2O00292 366 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 TLR5O60602 858 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 ADH1CP00326 375 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 CD72P21854 359 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 HOXD11P31277 338 aaPredicted RBP20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 EIF2DP41214 584 aaKnown RBP20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 KIF11P52732 1056 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 MFAP3P55082 362 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 BST2Q10589 180 aaKnown RBP20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 MEA1Q16626 185 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 GBP6Q6ZN66 633 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 SPEM1Q8N4L4 309 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 ZFYVE19Q96K21 471 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 CNOT6LQ96LI5 555 aaKnown RBP20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 LSM7Q9UK45 103 aaKnown RBP20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 PCDHGA2Q9Y5H1 932 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 CPQQ9Y646 472 aa20.37■□□□□ 0.85
CDKN1B-202ENST00000396340 XPO1O14980 1071 aaKnown RBP20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 MED7O43513 233 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 TPM2P07951 284 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 CHRNB1P11230 501 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 CD19P15391 556 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 MTIF2P46199 727 aaKnown RBP20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 ORC1Q13415 861 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 EML3Q32P44 896 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 TMEM270Q6UE05 265 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 GPIHBP1Q8IV16 184 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 ELMO3Q96BJ8 720 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 SLC22A12Q96S37 553 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 RNF38Q9H0F5 515 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 LRRC4Q9HBW1 653 aa20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 OLA1Q9NTK5 396 aaKnown RBP20.36■□□□□ 0.85
CDKN1B-202ENST00000396340 DNMT3LQ9UJW3 386 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms