RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 GNA15P30679 374 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 AVPR1AP37288 418 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 PPP3CCP48454 512 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 SLC8A3P57103 927 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 GPC5P78333 572 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 STILQ15468 1287 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 RAB41Q5JT25 222 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 PMF1Q6P1K2 205 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 DENND1BQ6P3S1 775 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 SLC47A2Q86VL8 602 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 UBALD2Q8IYN6 164 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 SLC35F5Q8WV83 523 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 OVCA2Q8WZ82 227 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 RNF38Q9H0F5 515 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 NLRC4Q9NPP4 1024 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 ZMYM5Q9UJ78 669 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 DUSP12Q9UNI6 340 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 SCML2Q9UQR0 700 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 OBSL1O75147 1896 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 MYH10P35580 1976 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 TRAV19A0A0A6YYK7 116 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 SERPINC1P01008 464 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 SETSIPP0DME0 302 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 HDCP19113 662 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 RFX1P22670 979 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 PLA2G4AP47712 749 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 RGS7P49802 495 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 TKTL1P51854 596 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 SNX30Q5VWJ9 437 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 PDZD8Q8NEN9 1154 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 NEK11Q8NG66 645 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 NDRG1Q92597 394 aaKnown RBP17.44■□□□□ 0.38
CXCL1-201ENST00000395761 NMUR1Q9HB89 426 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 OSER1Q9NX31 292 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 DENND4CQ5VZ89 1909 aa17.44■□□□□ 0.38
CXCL1-201ENST00000395761 ZNF638Q14966 1978 aaKnown RBP17.44■□□□□ 0.38
CXCL1-201ENST00000395761 PATJQ8NI35 1801 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 A0A1W2PQH9 124 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 F8VZ95 297 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 PIK3R2O00459 728 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 DPYSL4O14531 572 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 MED7O43513 233 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 OAS1P00973 400 aaKnown RBP17.43■□□□□ 0.38
CXCL1-201ENST00000395761 USP17L7P0C7H9 530 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 SRFP11831 508 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 PSMC3P17980 439 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 GPD2P43304 727 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 UBASH3AP57075 661 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 JAM2P57087 298 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 PTK2Q05397 1052 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 NR1I3Q14994 352 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 FILIP1LQ4L180 1135 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 IER5LQ5T953 404 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 SMYD5Q6GMV2 418 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 TRIM67Q6ZTA4 783 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 CCDC186Q7Z3E2 898 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 SCD5Q86SK9 330 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 MFSD6LQ8IWD5 586 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 CELF5Q8N6W0 485 aaKnown RBP17.43■□□□□ 0.38
CXCL1-201ENST00000395761 RIN3Q8TB24 985 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 KCTD13Q8WZ19 329 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 E2F7Q96AV8 911 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 TRMT61BQ9BVS5 477 aaKnown RBP17.43■□□□□ 0.38
CXCL1-201ENST00000395761 ULBP1Q9BZM6 244 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 CCSER2Q9H7U1 834 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 GRPEL1Q9HAV7 217 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 C11orf16Q9NQ32 467 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 TDP1Q9NUW8 608 aa17.43■□□□□ 0.38
CXCL1-201ENST00000395761 FAM86C2PA6NEL3 165 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 COCHO43405 550 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 CKMP06732 381 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 LCP1P13796 627 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 ZXDBP98169 803 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 SIGLEC14Q08ET2 396 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 ADIGQ0VDE8 80 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 HECTD3Q5T447 861 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 LRRC4Q9HBW1 653 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 SLC2A4RGQ9NR83 387 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 TLR8Q9NR97 1041 aaKnown RBP17.42■□□□□ 0.38
CXCL1-201ENST00000395761 OBP2AQ9NY56 170 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 CYTH4Q9UIA0 394 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 ANAPC1Q9H1A4 1944 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 TRIOO75962 3097 aa17.42■□□□□ 0.38
CXCL1-201ENST00000395761 AP5Z1O43299 807 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 CBFA2T2O43439 604 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 GFPT2O94808 682 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 OLFM2O95897 454 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 TBX18O95935 607 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 ZBED1O96006 694 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 CYP11B1P15538 503 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 PFKLP17858 780 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 GDI1P31150 447 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 MRE11P49959 708 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 BPIFB4P59827 614 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 ZNF268Q14587 947 aaPredicted RBP17.41■□□□□ 0.38
CXCL1-201ENST00000395761 PM20D1Q6GTS8 502 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 PASD1Q8IV76 773 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 WDTC1Q8N5D0 677 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 TTC16Q8NEE8 873 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 BPIFB1Q8TDL5 484 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms