RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 FBXO22Q8NEZ5 403 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 SLC35F5Q8WV83 523 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 B3GALT6Q96L58 329 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 TTPALQ9BTX7 342 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 VIPAS39Q9H9C1 493 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 DDX56Q9NY93 547 aaKnown RBP20.25■□□□□ 0.83
LMNB1-202ENST00000395354 DSEQ9UL01 958 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 NR2E1Q9Y466 385 aa20.25■□□□□ 0.83
LMNB1-202ENST00000395354 MYO9BQ13459 2157 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 GOLGA8SH3BPF8 625 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 GABRDO14764 452 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 CYP11A1P05108 521 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 NNTQ13423 1086 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 KIAA1841Q6NSI8 718 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 POLNQ7Z5Q5 900 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 TMEM110Q86TL2 294 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 TTC30AQ86WT1 665 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 RCOR2Q8IZ40 523 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 SPPL3Q8TCT6 385 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 ARNTL2Q8WYA1 636 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 SEC14L1Q92503 715 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 RBM41Q96IZ5 413 aaKnown RBP20.24■□□□□ 0.83
LMNB1-202ENST00000395354 CHST7Q9NS84 486 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 TJP2Q9UDY2 1190 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 PCYOX1Q9UHG3 505 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 AMACRQ9UHK6 382 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 LZTS1Q9Y250 596 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 USTQ9Y2C2 406 aa20.24■□□□□ 0.83
LMNB1-202ENST00000395354 H3BNC9 293 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 SASH3O75995 380 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 MYBL2P10244 700 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 PSMA2P25787 234 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 RPL34P49207 117 aaKnown RBP20.23■□□□□ 0.83
LMNB1-202ENST00000395354 FNTAP49354 379 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 BCAT1P54687 386 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 COPS2P61201 443 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 MRPS25P82663 173 aaKnown RBP20.23■□□□□ 0.83
LMNB1-202ENST00000395354 BST2Q10589 180 aaKnown RBP20.23■□□□□ 0.83
LMNB1-202ENST00000395354 GPM6BQ13491 265 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 CASP8Q14790 479 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 SIX1Q15475 284 aaPredicted RBP20.23■□□□□ 0.83
LMNB1-202ENST00000395354 RTP2Q5QGT7 225 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 OVOS1Q6IE37 1185 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 SPATA18Q8TC71 538 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 CAVIN3Q969G5 261 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 RAB17Q9H0T7 212 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 DPEP3Q9H4B8 488 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 LRRC19Q9H756 370 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 METTL5Q9NRN9 209 aaKnown RBP20.23■□□□□ 0.83
LMNB1-202ENST00000395354 HOMER3Q9NSC5 361 aa20.23■□□□□ 0.83
LMNB1-202ENST00000395354 F8VP50 259 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 OAZ2O95190 189 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 SCNN1AP37088 669 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 SSR1P43307 286 aaKnown RBP20.22■□□□□ 0.83
LMNB1-202ENST00000395354 LHX1P48742 406 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 DR1Q01658 176 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 YWHAHQ04917 246 aaPredicted RBP20.22■□□□□ 0.83
LMNB1-202ENST00000395354 UBE3AQ05086 875 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 VARS2Q5ST30 1063 aaKnown RBP20.22■□□□□ 0.83
LMNB1-202ENST00000395354 JOSD2Q8TAC2 188 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 POF1BQ8WVV4 589 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 CASKIN2Q8WXE0 1202 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 MAGOHBQ96A72 148 aaKnown RBP20.22■□□□□ 0.83
LMNB1-202ENST00000395354 HERC2P3Q9BVR0 1158 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 ST7Q9NRC1 585 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 FAM49BQ9NUQ9 324 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 RASAL2Q9UJF2 1139 aa20.22■□□□□ 0.83
LMNB1-202ENST00000395354 UTP11Q9Y3A2 253 aaKnown RBP20.22■□□□□ 0.83
LMNB1-202ENST00000395354 VWA8A3KMH1 1905 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 E5RJQ4 531 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 GRM6O15303 877 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 PDGFRBP09619 1106 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 RARAP10276 462 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 LMO2P25791 158 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 PTPN7P35236 360 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 HADHQ16836 314 aaKnown RBP20.21■□□□□ 0.83
LMNB1-202ENST00000395354 FAM102AQ5T9C2 384 aaPredicted RBP20.21■□□□□ 0.83
LMNB1-202ENST00000395354 KIAA0319Q5VV43 1072 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 ADAT2Q7Z6V5 191 aaKnown RBP20.21■□□□□ 0.83
LMNB1-202ENST00000395354 OSTM1Q86WC4 334 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 KRT222Q8N1A0 295 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 B3GALNT2Q8NCR0 500 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 RIN2Q8WYP3 895 aaPredicted RBP20.21■□□□□ 0.83
LMNB1-202ENST00000395354 ACBD3Q9H3P7 528 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 PLXNA4Q9HCM2 1894 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 TTI1O43156 1089 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 KRT7P08729 469 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 DNAJB1P25685 340 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 ACADSBP45954 432 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 GLUD2P49448 558 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 CARSP49589 748 aaKnown RBP20.21■□□□□ 0.83
LMNB1-202ENST00000395354 ZNF143P52747 638 aaPredicted RBP20.21■□□□□ 0.83
LMNB1-202ENST00000395354 ERVFC1P60507 584 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 DSG1Q02413 1049 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 PDE4CQ08493 712 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 MRPL58Q14197 206 aaKnown RBP20.21■□□□□ 0.83
LMNB1-202ENST00000395354 OR6B2Q6IFH4 312 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 PMF1Q6P1K2 205 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 FAM183BPQ6ZVS7 135 aa20.21■□□□□ 0.83
LMNB1-202ENST00000395354 ANKS3Q6ZW76 656 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms