RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ARL4CP56559 192 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 XYLT1Q86Y38 959 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 BBOF1Q8ND07 529 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 CNPY3Q9BT09 278 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 DCTN4Q9UJW0 460 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 RBL1P28749 1068 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 CNGA2Q16280 664 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 GLT1D1Q96MS3 346 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 SMYD2Q9NRG4 433 aa16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMARCD1-202ENST00000394963 SIGLEC16A6NMB1 481 aa16.58■□□□□ 0.25
SMARCD1-202ENST00000394963 PIGRP01833 764 aa16.58■□□□□ 0.25
SMARCD1-202ENST00000394963 RARGP13631 454 aa16.58■□□□□ 0.25
SMARCD1-202ENST00000394963 CLCNKBP51801 687 aa16.58■□□□□ 0.25
SMARCD1-202ENST00000394963 GRB14Q14449 540 aa16.58■□□□□ 0.25
SMARCD1-202ENST00000394963 C9orf57Q5W0N0 161 aa16.58■□□□□ 0.25
SMARCD1-202ENST00000394963 DENND5BQ6ZUT9 1274 aa16.58■□□□□ 0.25
SMARCD1-202ENST00000394963 PAAF1Q9BRP4 392 aa16.58■□□□□ 0.25
SMARCD1-202ENST00000394963 FGFR1OP2Q9NVK5 253 aa16.58■□□□□ 0.25
SMARCD1-202ENST00000394963 ATP5DP30049 168 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 CA9Q16790 459 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 CDCA2Q69YH5 1023 aaPredicted RBP16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 DEFB128Q7Z7B8 93 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 TMEM59LQ9UK28 342 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 AP4E1Q9UPM8 1137 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 DFFAO00273 331 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 FAM200BP0CF97 657 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 PTGIRP43119 386 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 MOGSQ13724 837 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 ZNF410Q86VK4 478 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 MIB1Q86YT6 1006 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 FBXO36Q8NEA4 188 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 ZNF473Q8WTR7 871 aaKnown RBP16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 NSRP1Q9H0G5 558 aaKnown RBP16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 GRHL1Q9NZI5 618 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 LRFN2Q9ULH4 789 aa16.58■□□□□ 0.24
SMARCD1-202ENST00000394963 KCNA10Q16322 511 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 SOWAHAQ2M3V2 549 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 SV2CQ496J9 727 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 TTC30AQ86WT1 665 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 SNRNP25Q9BV90 132 aaKnown RBP16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 PPP1R12CQ9BZL4 782 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 ZNF518BQ9C0D4 1074 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 NINJ2Q9NZG7 142 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 CES2O00748 559 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 F7P08709 466 aaPredicted RBP16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 KITP10721 976 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 ABCG1P45844 678 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 TAP1Q03518 808 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 SOX4Q06945 474 aaPredicted RBP16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 ZDHHC24Q6UX98 284 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 KATNAL2Q8IYT4 538 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 VCPIP1Q96JH7 1222 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 IL1RAPL1Q9NZN1 696 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 LIASO43766 372 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 MT-ND3P03897 115 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 GBP1P32455 592 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 PHBP35232 272 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 VCPP55072 806 aaKnown RBP16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 MARCH8Q5T0T0 291 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 VSIG1Q86XK7 387 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 IFNL1Q8IU54 200 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 B3GALT6Q96L58 329 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 ULBP1Q9BZM6 244 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 PCYOX1Q9UHG3 505 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 SNX10Q9Y5X0 201 aa16.57■□□□□ 0.24
SMARCD1-202ENST00000394963 hCG_1818297A0A087WSY0 165 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 TTC4O95801 387 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 ZBTB48P10074 688 aaPredicted RBP16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 CPB1P15086 417 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 GRM5P41594 1212 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 GPD2P43304 727 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 EFTUD2Q15029 972 aaKnown RBP eCLIP16.56■□□□□ 0.241e-7■■■■■ 37.6
SMARCD1-202ENST00000394963 PIK3R5Q8WYR1 880 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 LGMNQ99538 433 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 TRIM56Q9BRZ2 755 aaKnown RBP16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 CYP3A43Q9HB55 503 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 PHIPQ8WWQ0 1821 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 IGKV6-21A0A0C4DH24 114 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 SPTLC1O15269 473 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 STK10O94804 968 aaKnown RBP16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 EPHB2P29323 1055 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 HOXA11P31270 313 aaPredicted RBP16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 ATICP31939 592 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 MNAT1P51948 309 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 PDE1BQ01064 536 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 ANKRD22Q5VYY1 191 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 KIAA1841Q6NSI8 718 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 PPP1R2P3Q6NXS1 205 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 AGR3Q8TD06 166 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 RNF139Q8WU17 664 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 PGBD4Q96DM1 585 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 RSAD1Q9HA92 442 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 FAM105AQ9NUU6 356 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 NAALADL1Q9UQQ1 740 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 MYBPHLA2RUH7 354 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 PQBP1O60828 265 aaKnown RBP16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 CYP2F1P24903 491 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 SREBF2Q12772 1141 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms