RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 TNS4Q8IZW8 715 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 ZNF786Q8N393 782 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 GALNT15Q8N3T1 639 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 MRIQ9BWK5 157 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 PAIP1Q9H074 479 aaKnown RBP9.17□□□□□ -0.94
RTN4-206ENST00000394611 ASCC2Q9H1I8 757 aaPredicted RBP9.17□□□□□ -0.94
RTN4-206ENST00000394611 EPB41L4BQ9H329 900 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 WHRNQ9P202 907 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 PCDHA3Q9Y5H8 950 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 LAMA4Q16363 1823 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 SLITRK3O94933 977 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 GSTA2P09210 222 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 SPATA31C1P0DKV0 1188 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 SRGAP2BP0DMP2 458 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 GLRA2P23416 452 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 YWHABP31946 246 aaKnown RBP9.17□□□□□ -0.94
RTN4-206ENST00000394611 PPP4CP60510 307 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 KLHL38Q2WGJ6 581 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 LDLRAP1Q5SW96 308 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 TXNRD3NBQ6F5E7 133 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 ITPRIPL1Q6GPH6 555 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 ACAD10Q6JQN1 1059 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 GPAT2Q6NUI2 795 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 HEATR4Q86WZ0 1026 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 ULK2Q8IYT8 1036 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 NUP93Q8N1F7 819 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 RASGEF1CQ8N431 466 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 CYGBQ8WWM9 190 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 HSPBAP1Q96EW2 488 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 KREMEN1Q96MU8 473 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 MIPEPQ99797 713 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 PHACTR1Q9C0D0 580 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 RMI1Q9H9A7 625 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 HACL1Q9UJ83 578 aa9.17□□□□□ -0.94
RTN4-206ENST00000394611 PAIP2BQ9ULR5 123 aaKnown RBP9.17□□□□□ -0.94
RTN4-206ENST00000394611 PRRC2BQ5JSZ5 2229 aaKnown RBP9.17□□□□□ -0.94
RTN4-206ENST00000394611 K7ERI5 159 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 COPAP53621 1224 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 PLOD1Q02809 727 aaPredicted RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 PPIDQ08752 370 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 MMRN1Q13201 1228 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 ITGA9Q13797 1035 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 COBLL1Q53SF7 1204 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 LRRC8EQ6NSJ5 796 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 SREK1Q8WXA9 508 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 ZNF333Q96JL9 665 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 ECSITQ9BQ95 431 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 TARS2Q9BW92 718 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 NMRK2Q9NPI5 230 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 RBAKQ9NYW8 714 aaPredicted RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 WDR35Q9P2L0 1181 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 ZNF70Q9UC06 446 aaPredicted RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 MYO18AQ92614 2054 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 AKAP10O43572 662 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 UGT1A9O60656 530 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 FESP07332 822 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 VAV1P15498 845 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 EPHX2P34913 555 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 PRKCIP41743 596 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 PGGT1BP53609 377 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 DMPKQ09013 629 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 PDK4Q16654 411 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 EFHC1Q5JVL4 640 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 RNF43Q68DV7 783 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 DLK2Q6UY11 383 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 EXOC8Q8IYI6 725 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 TTC25Q96NG3 672 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 UGT1A7Q9HAW7 530 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 UGT1A10Q9HAW8 530 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 UGT1A8Q9HAW9 530 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 OLFML3Q9NRN5 406 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 UVRAGQ9P2Y5 699 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 HERC5Q9UII4 1024 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 PRR12Q9ULL5 1215 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 MTO1Q9Y2Z2 717 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 UBE4BO95155 1302 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 SAC3D1A6NKF1 404 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 SLC16A3O15427 465 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 FOSP01100 380 aaPredicted RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 MAGP20916 626 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 FUT4P22083 530 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 HOXD13P35453 343 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 TBL3Q12788 808 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 DLG1Q12959 904 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 WASHC2DQ5SRD0 308 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 C6orf52Q5T4I8 152 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 MTHFD1LQ6UB35 978 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 TSHZ1Q6ZSZ6 1077 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 MARK2Q7KZI7 788 aaKnown RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 AMIGO2Q86SJ2 522 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 OR6Y1Q8NGX8 325 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 SHKBP1Q8TBC3 707 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 ZBED3Q96IU2 234 aaPredicted RBP9.16□□□□□ -0.94
RTN4-206ENST00000394611 HAUS8Q9BT25 410 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.16□□□□□ -0.94
RTN4-206ENST00000394611 PCYOX1Q9UHG3 505 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 ZNF180Q9UJW8 692 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 CDK5RAP2Q96SN8 1893 aa9.16□□□□□ -0.94
RTN4-206ENST00000394611 LINC00854A0A1B0GVQ3 168 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms