RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 GPR25O00155 361 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 NFKBIEO00221 500 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 ACKR2O00590 384 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 APOL1O14791 398 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 OSBPP22059 807 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 Q3C1V9 767 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 C6orf163Q5TEZ5 329 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 RPAINQ86UA6 219 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 IGDCC3Q8IVU1 814 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 NKD2Q969F2 451 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-203ENST00000394419 B3GNT5Q9BYG0 378 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 ELOVL4Q9GZR5 314 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 WDR35Q9P2L0 1181 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 CPSF3Q9UKF6 684 aaKnown RBP10.98□□□□□ -0.65
ACTN1-203ENST00000394419 H3BRJ5 948 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 APOC4-APOC2K7ER74 178 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 TCEA3O75764 348 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 APOC2P02655 101 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 INSRRP14616 1297 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 RPS12P25398 132 aaKnown RBP10.98□□□□□ -0.65
ACTN1-203ENST00000394419 ASPAP45381 313 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 CHI3L2Q15782 390 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 PPFIBP2Q8ND30 876 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 FAM13CQ8NE31 585 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 AGAP3Q96P47 875 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 MMP19Q99542 508 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 OSBPL1AQ9BXW6 950 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 NKX1-2Q9UD57 310 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-203ENST00000394419 HES2Q9Y543 173 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 GREB1LQ9C091 1923 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-203ENST00000394419 IRF6O14896 467 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 CREB3O43889 395 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 HOXC6P09630 235 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 ZNF286BP0CG31 522 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 GCAP28676 217 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 TTC7BQ86TV6 843 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 XYLT1Q86Y38 959 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 SMC1BQ8NDV3 1235 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 SLC35B2Q8TB61 432 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 PTPRN2Q92932 1015 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 DCPSQ96C86 337 aaKnown RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 PIWIL1Q96J94 861 aaKnown RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 TTC1Q99614 292 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 LPIN3Q9BQK8 851 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 NT5C1AQ9BXI3 368 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 ACSS3Q9H6R3 686 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 ZNF395Q9H8N7 513 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 PGAP2Q9UHJ9 254 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 A8MXQ7 604 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 B2RBV5 119 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 CYB561D2O14569 222 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 NPTXRO95502 500 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 TRUB2O95900 331 aaKnown RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 ZRSR2Q15696 482 aaKnown RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 WLSQ5T9L3 541 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 PRPF39Q86UA1 669 aaKnown RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 SERAC1Q96JX3 654 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 SRPK1Q96SB4 655 aaKnown RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 NIFKQ9BYG3 293 aaKnown RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 SDCBP2Q9H190 292 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 RNPEPQ9H4A4 650 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 STYXL1Q9Y6J8 313 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 ADM5C9JUS6 153 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 PRPF4O43172 522 aaKnown RBP eCLIP10.97□□□□□ -0.658e-7■■■□□ 17.4
ACTN1-203ENST00000394419 OAS1P00973 400 aaKnown RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 STIP1P31948 543 aaKnown RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 PGM1P36871 562 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 AP1B1Q10567 949 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 RCN1Q15293 331 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 KIZQ2M2Z5 673 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 GALNTL6Q49A17 601 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 FAM183BPQ6ZVS7 135 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 REPS2Q8NFH8 660 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 CNPY3Q9BT09 278 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 SMARCAD1Q9H4L7 1026 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 ARL8BQ9NVJ2 186 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 KLK14Q9P0G3 267 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 ZMYND8Q9ULU4 1186 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-203ENST00000394419 SNCAIPQ9Y6H5 919 aa10.97□□□□□ -0.65
ACTN1-203ENST00000394419 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-203ENST00000394419 UGT1A9O60656 530 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 CCDC22O60826 627 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 SERPINB4P48594 390 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 ATXN1P54253 815 aaKnown RBP10.96□□□□□ -0.65
ACTN1-203ENST00000394419 GSCP56915 257 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-203ENST00000394419 CLDN10P78369 228 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 MAP3K10Q02779 954 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 LRRC36Q1X8D7 754 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 EFHC2Q5JST6 749 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 C16orf46Q6P387 395 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 CES3Q6UWW8 571 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 CLNKQ7Z7G1 428 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 SLC4A11Q8NBS3 891 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 CLMNQ96JQ2 1002 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 PPP1R36Q96LQ0 422 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 UGT1A7Q9HAW7 530 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 UGT1A10Q9HAW8 530 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 UGT1A8Q9HAW9 530 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 DPP3Q9NY33 737 aa10.96□□□□□ -0.65
ACTN1-203ENST00000394419 PRKAG3Q9UGI9 489 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms