RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 RSPO2Q6UXX9 243 aaPredicted RBP21.27■■□□□ 1
HDDC3-202ENST00000394272 ZDHHC14Q8IZN3 488 aa21.27■■□□□ 1
HDDC3-202ENST00000394272 ANKRD7Q92527 254 aa21.27■■□□□ 1
HDDC3-202ENST00000394272 RHOXF2Q9BQY4 288 aa21.27■■□□□ 1
HDDC3-202ENST00000394272 OXCT2Q9BYC2 517 aaPredicted RBP21.27■■□□□ 1
HDDC3-202ENST00000394272 USP18Q9UMW8 372 aa21.27■■□□□ 1
HDDC3-202ENST00000394272 MRPL42Q9Y6G3 142 aaKnown RBP21.27■■□□□ 1
HDDC3-202ENST00000394272 H7C4K7 107 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 DAB1O75553 588 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 FGBP02675 491 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 KRT7P08729 469 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 USP41Q3LFD5 358 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 RAB6CQ53S08 254 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 BHLHA9Q7RTU4 235 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 SLC39A11Q8N1S5 342 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 SCML4Q8N228 414 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 CENPIQ92674 756 aaPredicted RBP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 ZNF558Q96NG5 402 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 RAB6CQ9H0N0 254 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 CHST7Q9NS84 486 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 DDX56Q9NY93 547 aaKnown RBP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 ABI2Q9NYB9 513 aaPredicted RBP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 USP3Q9Y6I4 520 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 COL4A4P53420 1690 aaPredicted RBP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 FSCN2O14926 492 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 SART1O43290 800 aaKnown RBP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 TRUB2O95900 331 aaKnown RBP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 MATKP42679 507 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 EPHB4P54760 987 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 YWHAZP63104 245 aaKnown RBP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 ATP11AP98196 1134 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 CDO1Q16878 200 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 SPOUT1Q5T280 376 aaKnown RBP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 PM20D1Q6GTS8 502 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 VSTM1Q6UX27 236 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 CYP4V2Q6ZWL3 525 aaPredicted RBP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 ANKS1BQ7Z6G8 1248 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 C7orf61Q8IZ16 206 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 RCOR2Q8IZ40 523 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 FAM172AQ8WUF8 416 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 FAM149B1Q96BN6 582 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 RBM41Q96IZ5 413 aaKnown RBP21.26■□□□□ 0.99
HDDC3-202ENST00000394272 SLC2A13Q96QE2 648 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 PEBP4Q96S96 227 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 YME1L1Q96TA2 773 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 HERPUD2Q9BSE4 406 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 LRRC1Q9BTT6 524 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 ADAM33Q9BZ11 813 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 KLHL11Q9NVR0 708 aa21.26■□□□□ 0.99
HDDC3-202ENST00000394272 TCRBV7S2A1N4TA0A589 114 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 TNFRSF10BO14763 440 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 ZBED1O96006 694 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 USP17L7P0C7H9 530 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 LAG3P18627 525 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 TFE3P19532 575 aaPredicted RBP21.25■□□□□ 0.99
HDDC3-202ENST00000394272 GRIK1P39086 918 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 HDAC4P56524 1084 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 GPR17Q13304 367 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 SIX1Q15475 284 aaPredicted RBP21.25■□□□□ 0.99
HDDC3-202ENST00000394272 TMEM240Q5SV17 173 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 ADAT2Q7Z6V5 191 aaKnown RBP21.25■□□□□ 0.99
HDDC3-202ENST00000394272 DEFB106AQ8N104 65 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 RAPGEF5Q92565 580 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 SLITRK1Q96PX8 696 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 KRT12Q99456 494 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 NGRNQ9NPE2 291 aaKnown RBP21.25■□□□□ 0.99
HDDC3-202ENST00000394272 PCSK1NQ9UHG2 260 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 PCDHB5Q9Y5E4 795 aa21.25■□□□□ 0.99
HDDC3-202ENST00000394272 LAMA2P24043 3122 aaKnown RBP21.25■□□□□ 0.99
HDDC3-202ENST00000394272 YJEFN3A6XGL0 299 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 ZBBXA8MT70 800 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 E7ENQ6 273 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 GJB5O95377 273 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 KRT1P04264 644 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 MAGEA11P43364 429 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 HTRA4P83105 476 aaPredicted RBP21.24■□□□□ 0.99
HDDC3-202ENST00000394272 SMTNL2Q2TAL5 461 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 PRSS55Q6UWB4 352 aaPredicted RBP21.24■□□□□ 0.99
HDDC3-202ENST00000394272 HFE2Q6ZVN8 426 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 CCDC50Q8IVM0 306 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 COLGALT1Q8NBJ5 622 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 PIK3R5Q8WYR1 880 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 IRGQQ8WZA9 623 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 NT5C3BQ969T7 300 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 RNF25Q96BH1 459 aaPredicted RBP21.24■□□□□ 0.99
HDDC3-202ENST00000394272 ACSF2Q96CM8 615 aaPredicted RBP21.24■□□□□ 0.99
HDDC3-202ENST00000394272 PNKPQ96T60 521 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 NCAPGQ9BPX3 1015 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 PARD6BQ9BYG5 372 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 ZWILCHQ9H900 591 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 POPDC2Q9HBU9 364 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 MTRRQ9UBK8 725 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 TARSL2A2RTX5 802 aaKnown RBP21.24■□□□□ 0.99
HDDC3-202ENST00000394272 CARNS1A5YM72 827 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 SOD2P04179 222 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 FYNP06241 537 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 RALAP11233 206 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 DESP17661 470 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 NOS2P35228 1153 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms