RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 MBL2P11226 248 aaPredicted RBP32.49■■■□□ 2.79
CMTM4-202ENST00000394106 TCF3P15923 654 aa32.49■■■□□ 2.79
CMTM4-202ENST00000394106 TBXAS1P24557 533 aaPredicted RBP32.49■■■□□ 2.79
CMTM4-202ENST00000394106 ZXDBP98169 803 aa32.49■■■□□ 2.79
CMTM4-202ENST00000394106 KCNH2Q12809 1159 aa32.49■■■□□ 2.79
CMTM4-202ENST00000394106 PON2Q15165 354 aa32.49■■■□□ 2.79
CMTM4-202ENST00000394106 CREBRFQ8IUR6 639 aa32.49■■■□□ 2.79
CMTM4-202ENST00000394106 MLKLQ8NB16 471 aa32.49■■■□□ 2.79
CMTM4-202ENST00000394106 DUSP16Q9BY84 665 aa32.49■■■□□ 2.79
CMTM4-202ENST00000394106 FAM92AA1XBS5 289 aa32.48■■■□□ 2.79
CMTM4-202ENST00000394106 HHLA1C9JL84 531 aa32.48■■■□□ 2.79
CMTM4-202ENST00000394106 HOXD11P31277 338 aaPredicted RBP32.48■■■□□ 2.79
CMTM4-202ENST00000394106 MARSP56192 900 aaKnown RBP32.48■■■□□ 2.79
CMTM4-202ENST00000394106 HECTD3Q5T447 861 aa32.48■■■□□ 2.79
CMTM4-202ENST00000394106 GBP4Q96PP9 640 aa32.48■■■□□ 2.79
CMTM4-202ENST00000394106 CCSER2Q9H7U1 834 aa32.48■■■□□ 2.79
CMTM4-202ENST00000394106 P4HA2O15460 535 aa32.47■■■□□ 2.79
CMTM4-202ENST00000394106 COCHO43405 550 aa32.47■■■□□ 2.79
CMTM4-202ENST00000394106 AFPP02771 609 aaKnown RBP32.47■■■□□ 2.79
CMTM4-202ENST00000394106 CHRNB1P11230 501 aa32.47■■■□□ 2.79
CMTM4-202ENST00000394106 ACO1P21399 889 aaKnown RBP32.47■■■□□ 2.79
CMTM4-202ENST00000394106 MTAPQ13126 283 aa32.47■■■□□ 2.79
CMTM4-202ENST00000394106 CPA6Q8N4T0 437 aa32.47■■■□□ 2.79
CMTM4-202ENST00000394106 ATP2A3Q93084 1043 aa32.47■■■□□ 2.79
CMTM4-202ENST00000394106 RBM12Q9NTZ6 932 aaKnown RBP32.47■■■□□ 2.79
CMTM4-202ENST00000394106 ZDHHC11BP0C7U3 371 aa32.46■■■□□ 2.79
CMTM4-202ENST00000394106 LRRC32Q14392 662 aa32.46■■■□□ 2.79
CMTM4-202ENST00000394106 SNX30Q5VWJ9 437 aa32.46■■■□□ 2.79
CMTM4-202ENST00000394106 MAML2Q8IZL2 1156 aaPredicted RBP32.46■■■□□ 2.79
CMTM4-202ENST00000394106 PPM1KQ8N3J5 372 aa32.46■■■□□ 2.79
CMTM4-202ENST00000394106 MED15Q96RN5 788 aa32.46■■■□□ 2.79
CMTM4-202ENST00000394106 NACA2Q9H009 215 aa32.46■■■□□ 2.79
CMTM4-202ENST00000394106 LINC00597Q9H2U6 94 aa32.46■■■□□ 2.79
CMTM4-202ENST00000394106 CHRDQ9H2X0 955 aa32.46■■■□□ 2.79
CMTM4-202ENST00000394106 PNPLA8Q9NP80 782 aa32.46■■■□□ 2.79
CMTM4-202ENST00000394106 CFAP97Q9P2B7 532 aa32.46■■■□□ 2.79
CMTM4-202ENST00000394106 SCAMP3O14828 347 aaKnown RBP32.45■■■□□ 2.79
CMTM4-202ENST00000394106 CYP26A1O43174 497 aa32.45■■■□□ 2.79
CMTM4-202ENST00000394106 SP9P0CG40 484 aa32.45■■■□□ 2.79
CMTM4-202ENST00000394106 NBL1P41271 181 aa32.45■■■□□ 2.79
CMTM4-202ENST00000394106 PGFP49763 221 aa32.45■■■□□ 2.79
CMTM4-202ENST00000394106 EML3Q32P44 896 aa32.45■■■□□ 2.79
CMTM4-202ENST00000394106 ARHGAP17Q68EM7 881 aa32.45■■■□□ 2.79
CMTM4-202ENST00000394106 LMO3Q8TAP4 145 aa32.45■■■□□ 2.79
CMTM4-202ENST00000394106 CNOT6LQ96LI5 555 aaKnown RBP32.45■■■□□ 2.79
CMTM4-202ENST00000394106 IPO9Q96P70 1041 aaKnown RBP32.45■■■□□ 2.79
CMTM4-202ENST00000394106 ECT2Q9H8V3 914 aa32.45■■■□□ 2.79
CMTM4-202ENST00000394106 TLR8Q9NR97 1041 aaKnown RBP32.45■■■□□ 2.79
CMTM4-202ENST00000394106 SCML2Q9UQR0 700 aa32.45■■■□□ 2.79
CMTM4-202ENST00000394106 CACNA1IQ9P0X4 2223 aa32.45■■■□□ 2.78
CMTM4-202ENST00000394106 CD19P15391 556 aa32.44■■■□□ 2.78
CMTM4-202ENST00000394106 UBR7Q8N806 425 aa32.44■■■□□ 2.78
CMTM4-202ENST00000394106 EHBP1Q8NDI1 1231 aa32.44■■■□□ 2.78
CMTM4-202ENST00000394106 TUBP50607 506 aa32.43■■■□□ 2.78
CMTM4-202ENST00000394106 AMPD2Q01433 879 aa32.43■■■□□ 2.78
CMTM4-202ENST00000394106 CSTF1Q05048 431 aaKnown RBP32.43■■■□□ 2.78
CMTM4-202ENST00000394106 TPD52L1Q16890 204 aaPredicted RBP32.43■■■□□ 2.78
CMTM4-202ENST00000394106 GOLGA7BQ2TAP0 167 aa32.43■■■□□ 2.78
CMTM4-202ENST00000394106 DPCR1Q3MIW9 517 aa32.43■■■□□ 2.78
CMTM4-202ENST00000394106 SGO2Q562F6 1265 aa32.43■■■□□ 2.78
CMTM4-202ENST00000394106 RRAGAQ7L523 313 aa32.43■■■□□ 2.78
CMTM4-202ENST00000394106 DDX42Q86XP3 938 aaKnown RBP eCLIP32.43■■■□□ 2.78
CMTM4-202ENST00000394106 KAT5Q92993 513 aa32.43■■■□□ 2.78
CMTM4-202ENST00000394106 PCDHB4Q9Y5E5 795 aa32.43■■■□□ 2.78
CMTM4-202ENST00000394106 GJA4P35212 333 aa32.42■■■□□ 2.78
CMTM4-202ENST00000394106 KIF11P52732 1056 aa32.42■■■□□ 2.78
CMTM4-202ENST00000394106 DGKKQ5KSL6 1271 aa32.42■■■□□ 2.78
CMTM4-202ENST00000394106 TMEM270Q6UE05 265 aa32.42■■■□□ 2.78
CMTM4-202ENST00000394106 ARHGEF19Q8IW93 802 aa32.42■■■□□ 2.78
CMTM4-202ENST00000394106 CHFRQ96EP1 664 aa32.42■■■□□ 2.78
CMTM4-202ENST00000394106 INTS2Q9H0H0 1204 aaKnown RBP32.42■■■□□ 2.78
CMTM4-202ENST00000394106 FBXO4Q9UKT5 387 aa32.42■■■□□ 2.78
CMTM4-202ENST00000394106 TLR5O60602 858 aa32.41■■■□□ 2.78
CMTM4-202ENST00000394106 SLC8A3P57103 927 aa32.41■■■□□ 2.78
CMTM4-202ENST00000394106 ANKRD52Q8NB46 1076 aa32.41■■■□□ 2.78
CMTM4-202ENST00000394106 IER2Q9BTL4 223 aa32.41■■■□□ 2.78
CMTM4-202ENST00000394106 TSPAN16Q9UKR8 245 aa32.41■■■□□ 2.78
CMTM4-202ENST00000394106 R4GN57 208 aa32.41■■■□□ 2.78
CMTM4-202ENST00000394106 A0A1W2PQH9 124 aa32.4■■■□□ 2.78
CMTM4-202ENST00000394106 NFATC1O95644 943 aa32.4■■■□□ 2.78
CMTM4-202ENST00000394106 GRSF1Q12849 480 aaKnown RBP eCLIP32.4■■■□□ 2.78
CMTM4-202ENST00000394106 NR1H3Q13133 447 aa32.4■■■□□ 2.78
CMTM4-202ENST00000394106 TSSK4Q6SA08 328 aa32.4■■■□□ 2.78
CMTM4-202ENST00000394106 Q6ZS52 159 aa32.4■■■□□ 2.78
CMTM4-202ENST00000394106 TTC30AQ86WT1 665 aa32.4■■■□□ 2.78
CMTM4-202ENST00000394106 ZFRQ96KR1 1074 aaKnown RBP32.4■■■□□ 2.78
CMTM4-202ENST00000394106 NMUR1Q9HB89 426 aa32.4■■■□□ 2.78
CMTM4-202ENST00000394106 OSER1Q9NX31 292 aa32.4■■■□□ 2.78
CMTM4-202ENST00000394106 HESX1Q9UBX0 185 aa32.4■■■□□ 2.78
CMTM4-202ENST00000394106 PROB1E7EW31 1015 aa32.39■■■□□ 2.78
CMTM4-202ENST00000394106 SLC9A3R1O14745 358 aaPredicted RBP32.39■■■□□ 2.78
CMTM4-202ENST00000394106 VDRP11473 427 aa32.39■■■□□ 2.78
CMTM4-202ENST00000394106 CCINQ13939 588 aa32.39■■■□□ 2.78
CMTM4-202ENST00000394106 NAIF1Q69YI7 327 aaPredicted RBP32.39■■■□□ 2.78
CMTM4-202ENST00000394106 PIGZQ86VD9 579 aa32.39■■■□□ 2.78
CMTM4-202ENST00000394106 DACH1Q9UI36 760 aa32.39■■■□□ 2.78
CMTM4-202ENST00000394106 NAGPAQ9UK23 515 aa32.39■■■□□ 2.78
CMTM4-202ENST00000394106 SH3BP1Q9Y3L3 701 aa32.39■■■□□ 2.78
CMTM4-202ENST00000394106 GOLGA6L22H0YM25 854 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 TRDMT1O14717 391 aaKnown RBP32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms