RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 TOP6BLQ8N6T0 577 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 EPS8L3Q8TE67 593 aaKnown RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 NKD2Q969F2 451 aaPredicted RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 SENP8Q96LD8 212 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 TSPAN18Q96SJ8 248 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 ADAM7Q9H2U9 754 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 SSUH2Q9Y2M2 353 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 CASP8AP2Q9UKL3 1982 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 GPR182O15218 404 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 IRAK1P51617 712 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 NRLP54845 237 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 NKX3-2P78367 333 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 KYNUQ16719 465 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 CA9Q16790 459 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 PAN2Q504Q3 1202 aaKnown RBP11.48□□□□□ -0.57
CASP3-202ENST00000393585 LRRC31Q6UY01 552 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 CD99L2Q8TCZ2 262 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 STK32AQ8WU08 396 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 CAPNS2Q96L46 248 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 NOD1Q9Y239 953 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 DRG1Q9Y295 367 aaKnown RBP11.48□□□□□ -0.57
CASP3-202ENST00000393585 EFR3BQ9Y2G0 817 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 DPYSL4O14531 572 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 DNALI1O14645 258 aaPredicted RBP11.48□□□□□ -0.57
CASP3-202ENST00000393585 TRPA1O75762 1119 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 POMCP01189 267 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 ITGAVP06756 1048 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 HDAC4P56524 1084 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 ITGA7Q13683 1181 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 DPYSL3Q14195 570 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 MDH1BQ5I0G3 518 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 AGBL2Q5U5Z8 902 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 HIBCHQ6NVY1 386 aaPredicted RBP11.48□□□□□ -0.57
CASP3-202ENST00000393585 PIGZQ86VD9 579 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 HACE1Q8IYU2 909 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 SNRNP25Q9BV90 132 aaKnown RBP11.48□□□□□ -0.57
CASP3-202ENST00000393585 MAGEB5Q9BZ81 275 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 CHST12Q9NRB3 414 aa11.48□□□□□ -0.57
CASP3-202ENST00000393585 DDX43Q9NXZ2 648 aaKnown RBP11.48□□□□□ -0.57
CASP3-202ENST00000393585 I3L4J1 428 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 ENDOD1O94919 500 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 MAP3K6O95382 1288 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 PTPN1P18031 435 aaKnown RBP11.47□□□□□ -0.57
CASP3-202ENST00000393585 CAV1Q03135 178 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 ADIGQ0VDE8 80 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 KRT81Q14533 505 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 LPIN1Q14693 890 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 ZSCAN26Q16670 478 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 PAQR9Q6ZVX9 377 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 RPAINQ86UA6 219 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 HOOK3Q86VS8 718 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 C9orf72Q96LT7 481 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 MAK16Q9BXY0 300 aaKnown RBP11.47□□□□□ -0.57
CASP3-202ENST00000393585 RSAD1Q9HA92 442 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 SLC38A7Q9NVC3 462 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 THSD7BQ9C0I4 1608 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 APOC4-APOC2K7ER74 178 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 GABRDO14764 452 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 APOC2P02655 101 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 SNX16P57768 344 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 LONRF1Q17RB8 773 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 PPP6R3Q5H9R7 873 aaPredicted RBP11.47□□□□□ -0.57
CASP3-202ENST00000393585 FOXR1Q6PIV2 292 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 TRMT10CQ7L0Y3 403 aaKnown RBP11.47□□□□□ -0.57
CASP3-202ENST00000393585 SLC26A9Q7LBE3 791 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 ZC3H18Q86VM9 953 aaKnown RBP11.47□□□□□ -0.57
CASP3-202ENST00000393585 ZDHHC17Q8IUH5 632 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 TTC13Q8NBP0 860 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 BBOF1Q8ND07 529 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 SPATA18Q8TC71 538 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 HASPINQ8TF76 798 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 FAM149B1Q96BN6 582 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 ADAM2Q99965 735 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 MED10Q9BTT4 135 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 CRTAC1Q9NQ79 661 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 NINJ2Q9NZG7 142 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 SRRDQ9UH36 339 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 INPP5FQ9Y2H2 1132 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 GIT1Q9Y2X7 761 aa11.47□□□□□ -0.57
CASP3-202ENST00000393585 TTC4O95801 387 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 RBP3P10745 1247 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 CST5P28325 142 aaPredicted RBP11.46□□□□□ -0.57
CASP3-202ENST00000393585 NDUFV1P49821 464 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 EIF3EP60228 445 aaKnown RBP11.46□□□□□ -0.57
CASP3-202ENST00000393585 DEFB115Q30KQ5 88 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 HP1BP3Q5SSJ5 553 aaPredicted RBP11.46□□□□□ -0.57
CASP3-202ENST00000393585 C1orf228Q6PIY5 440 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 DSTYKQ6XUX3 929 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 CLEC20AQ6ZU45 233 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 PCSK9Q8NBP7 692 aaKnown RBP11.46□□□□□ -0.57
CASP3-202ENST00000393585 HSFY1Q96LI6 401 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 HNRNPABQ99729 332 aaKnown RBP11.46□□□□□ -0.57
CASP3-202ENST00000393585 DUSP16Q9BY84 665 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 PCDH9Q9HC56 1237 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 CALCOCO1Q9P1Z2 691 aa11.46□□□□□ -0.57
CASP3-202ENST00000393585 DDX20Q9UHI6 824 aaKnown RBP11.46□□□□□ -0.57
CASP3-202ENST00000393585 GOLGA8MH3BSY2 632 aa11.46□□□□□ -0.58
CASP3-202ENST00000393585 RASGRF2O14827 1237 aa11.46□□□□□ -0.58
CASP3-202ENST00000393585 XPO1O14980 1071 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms