RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 CACNA2D3Q8IZS8 1091 aa14.94□□□□□ -0.02
MKS1-203ENST00000393120 CYP4X1Q8N118 509 aa14.94□□□□□ -0.02
MKS1-203ENST00000393120 CENPIQ92674 756 aaPredicted RBP14.94□□□□□ -0.02
MKS1-203ENST00000393120 P3H4Q92791 437 aa14.94□□□□□ -0.02
MKS1-203ENST00000393120 LENG1Q96BZ8 264 aaPredicted RBP14.94□□□□□ -0.02
MKS1-203ENST00000393120 HSFY1Q96LI6 401 aa14.94□□□□□ -0.02
MKS1-203ENST00000393120 PRMT1Q99873 361 aaKnown RBP14.94□□□□□ -0.02
MKS1-203ENST00000393120 SNX25Q9H3E2 840 aa14.94□□□□□ -0.02
MKS1-203ENST00000393120 UBN1Q9NPG3 1134 aa14.94□□□□□ -0.02
MKS1-203ENST00000393120 CTNNAL1Q9UBT7 734 aa14.94□□□□□ -0.02
MKS1-203ENST00000393120 PIK3R2O00459 728 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 SPTLC1O15269 473 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 GRAP2O75791 330 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 LRPAP1P30533 357 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 PSMC4P43686 418 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 SLC18A1P54219 525 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 IRX5P78411 483 aaPredicted RBP14.93□□□□□ -0.02
MKS1-203ENST00000393120 ZNF200P98182 395 aaPredicted RBP14.93□□□□□ -0.02
MKS1-203ENST00000393120 PURAQ00577 322 aaKnown RBP14.93□□□□□ -0.02
MKS1-203ENST00000393120 PPARDQ03181 441 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 PDIA2Q13087 525 aaKnown RBP14.93□□□□□ -0.02
MKS1-203ENST00000393120 MMRN1Q13201 1228 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 FSCN1Q16658 493 aaKnown RBP14.93□□□□□ -0.02
MKS1-203ENST00000393120 OTUD6BQ8N6M0 293 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 TOP6BLQ8N6T0 577 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 SMG8Q8ND04 991 aaKnown RBP14.93□□□□□ -0.02
MKS1-203ENST00000393120 APPL2Q8NEU8 664 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 FAM172AQ8WUF8 416 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 FAF2Q96CS3 445 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 RTP4Q96DX8 246 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 DPEP3Q9H4B8 488 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 SLC24A2Q9UI40 661 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 IPPQ9Y573 584 aa14.93□□□□□ -0.02
MKS1-203ENST00000393120 EXOC1LA0A1B0GW35 172 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 CFAP69A5D8W1 941 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 FGFR1P11362 822 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 BRAFP15056 766 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 GCAP28676 217 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 INHBEP58166 350 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 ROR1Q01973 937 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 KRT81Q14533 505 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 RAB6CQ53S08 254 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 SLC9A4Q6AI14 798 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 C10orf67Q8IYJ2 551 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 ZBED8Q8IZ13 594 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 PLD5Q8N7P1 536 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 C7orf31Q8N865 590 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 FAM71DQ8N9W8 422 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 PPP1R13LQ8WUF5 828 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 PPM1EQ8WY54 764 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 TNIP3Q96KP6 325 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 ZNF670Q9BS34 389 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 APOL6Q9BWW8 343 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 RAB6CQ9H0N0 254 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 RASSF4Q9H2L5 321 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 PCDH18Q9HCL0 1135 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 SCN1AP35498 2009 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 ANKRD65E5RJM6 399 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 CREB1P16220 341 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 CYP2B6P20813 491 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 WARSP23381 471 aaKnown RBP14.92□□□□□ -0.02
MKS1-203ENST00000393120 LMO2P25791 158 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 ZNF157P51786 506 aaPredicted RBP14.92□□□□□ -0.02
MKS1-203ENST00000393120 HDAC4P56524 1084 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 ATP11AP98196 1134 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 BEX3Q00994 111 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 FASTKD3Q14CZ7 662 aaKnown RBP14.92□□□□□ -0.02
MKS1-203ENST00000393120 CDO1Q16878 200 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 ANKRD20A8PQ5CZ79 823 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 DARS2Q6PI48 645 aaKnown RBP14.92□□□□□ -0.02
MKS1-203ENST00000393120 PQLC3Q8N755 202 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.92□□□□□ -0.02
MKS1-203ENST00000393120 CABS1Q96KC9 395 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 C10orf88Q9H8K7 445 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 USP29Q9HBJ7 922 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 NGRNQ9NPE2 291 aaKnown RBP14.92□□□□□ -0.02
MKS1-203ENST00000393120 KLK14Q9P0G3 267 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 SENP1Q9P0U3 644 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 GTF2IRD1Q9UHL9 959 aa14.92□□□□□ -0.02
MKS1-203ENST00000393120 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.92□□□□□ -0.02
MKS1-203ENST00000393120 APOL1O14791 398 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 HUS1O60921 280 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 TOMM70O94826 608 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 CPP00450 1065 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 PHBP35232 272 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 LILRA4P59901 499 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 SOX4Q06945 474 aaPredicted RBP14.91□□□□□ -0.02
MKS1-203ENST00000393120 IFT88Q13099 833 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 ANKRD22Q5VYY1 191 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 SCYL2Q6P3W7 929 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 ARHGEF18Q6ZSZ5 1173 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 TRABD2AQ86V40 505 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 IFNL1Q8IU54 200 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 CCDC13Q8IYE1 715 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 LRRC34Q8IZ02 419 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 ATP11CQ8NB49 1132 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 CKAP2Q8WWK9 683 aa14.91□□□□□ -0.02
MKS1-203ENST00000393120 SNRNP25Q9BV90 132 aaKnown RBP14.91□□□□□ -0.02
MKS1-203ENST00000393120 B3GNT5Q9BYG0 378 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms