RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 ITGA7Q13683 1181 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 C9orf57Q5W0N0 161 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 KLF6Q99612 283 aaPredicted RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 WDCPQ9H6R7 721 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 COL4A5P29400 1685 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 DNAJC25-GNG10A0A024R161 153 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 DDX3YO15523 660 aaKnown RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 APOEP02649 317 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 SKIP12755 728 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 ETS1P14921 441 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 PTPN1P18031 435 aaKnown RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 AARSP49588 968 aaKnown RBP eCLIP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 YWHAZP63104 245 aaKnown RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 SLC6A3Q01959 620 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 YWHAHQ04917 246 aaPredicted RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 E2F5Q15329 346 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 C4orf50Q6ZRC1 276 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 C3orf62Q6ZUJ4 267 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 TRMT10CQ7L0Y3 403 aaKnown RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 TMEM130Q8N3G9 435 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 ATXN7L3BQ96GX2 97 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 ZNF512Q96ME7 567 aaPredicted RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 STRA6Q9BX79 667 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 CDC42EP4Q9H3Q1 356 aaKnown RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 GDF3Q9NR23 364 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 COL11A2P13942 1736 aaPredicted RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 BRCC3P46736 316 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 TTMPQ5BVD1 217 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 C4orf33Q8N1A6 199 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 MSL3Q8N5Y2 521 aaKnown RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 TTC17Q96AE7 1141 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 RILPQ96NA2 401 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 PADI3Q9ULW8 664 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 SLC45A1Q9Y2W3 748 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 PPP1R12AO14974 1030 aaPredicted RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 CILPO75339 1184 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 MMRN1Q13201 1228 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 SAPCD2Q86UD0 394 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 DCP1BQ8IZD4 617 aaKnown RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 B3GALNT2Q8NCR0 500 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 CHMP6Q96FZ7 201 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 SCYL1Q96KG9 808 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 ULBP1Q9BZM6 244 aa13.35□□□□□ -0.27
ERCC2-204ENST00000391945 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.35□□□□□ -0.27
ERCC2-204ENST00000391945 ERBB2P04626 1255 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 USP17L7P0C7H9 530 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 ALDH7A1P49419 539 aaKnown RBP13.34□□□□□ -0.27
ERCC2-204ENST00000391945 CCL23P55773 120 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 CTXN3Q4LDR2 81 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 LRIG3Q6UXM1 1119 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 MON1BQ7L1V2 547 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 SLFN11Q7Z7L1 901 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 TWNKQ96RR1 684 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 PRMT1Q99873 361 aaKnown RBP13.34□□□□□ -0.27
ERCC2-204ENST00000391945 SENP6Q9GZR1 1112 aaPredicted RBP13.34□□□□□ -0.27
ERCC2-204ENST00000391945 HAPLN2Q9GZV7 340 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 ALG13Q9NP73 1137 aaKnown RBP13.34□□□□□ -0.27
ERCC2-204ENST00000391945 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.34□□□□□ -0.27
ERCC2-204ENST00000391945 TJP2Q9UDY2 1190 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 ATP11BQ9Y2G3 1177 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 IGKV6D-21A0A0A0MT36 114 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 TMEM191CA6NGB0 347 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 O00370 1275 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 PPEF2O14830 753 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 SEPT4O43236 478 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 ANKRD20A3Q5VUR7 823 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 FBXW10Q5XX13 1052 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 TBC1D1Q86TI0 1168 aaPredicted RBP13.34□□□□□ -0.27
ERCC2-204ENST00000391945 SLC4A11Q8NBS3 891 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 NETO2Q8NC67 525 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 NDRG1Q92597 394 aaKnown RBP13.34□□□□□ -0.27
ERCC2-204ENST00000391945 PWWP2AQ96N64 755 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 ARHGAP39Q9C0H5 1083 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 PDLIM7Q9NR12 457 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 KATNAL2Q8IYT4 538 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 RYBPQ8N488 228 aaPredicted RBP13.34□□□□□ -0.27
ERCC2-204ENST00000391945 SLC13A1Q9BZW2 595 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 TRMT13Q9NUP7 481 aaKnown RBP13.34□□□□□ -0.27
ERCC2-204ENST00000391945 GABRQQ9UN88 632 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
ERCC2-204ENST00000391945 IQANK1A0A1B0GTG1 560 aa13.33□□□□□ -0.27
ERCC2-204ENST00000391945 KRT37O76014 449 aa13.33□□□□□ -0.27
ERCC2-204ENST00000391945 TROVE2P10155 538 aaKnown RBP eCLIP13.33□□□□□ -0.27
ERCC2-204ENST00000391945 AMPD1P23109 780 aa13.33□□□□□ -0.27
ERCC2-204ENST00000391945 VCPP55072 806 aaKnown RBP13.33□□□□□ -0.27
ERCC2-204ENST00000391945 BFSP2Q13515 415 aa13.33□□□□□ -0.27
ERCC2-204ENST00000391945 FAM171A1Q5VUB5 890 aa13.33□□□□□ -0.27
ERCC2-204ENST00000391945 CDCA2Q69YH5 1023 aaPredicted RBP13.33□□□□□ -0.27
ERCC2-204ENST00000391945 FSD1LQ9BXM9 530 aa13.33□□□□□ -0.27
ERCC2-204ENST00000391945 BFARQ9NZS9 450 aa13.33□□□□□ -0.27
ERCC2-204ENST00000391945 ZC3H7BQ9UGR2 993 aaKnown RBP13.33□□□□□ -0.27
ERCC2-204ENST00000391945 R3HDM2Q9Y2K5 976 aaKnown RBP13.33□□□□□ -0.27
ERCC2-204ENST00000391945 DCDC2CA8MYV0 355 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 CDH16O75309 829 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 STBD1O95210 358 aa13.33□□□□□ -0.28
ERCC2-204ENST00000391945 UNGP13051 313 aaPredicted RBP13.33□□□□□ -0.28
ERCC2-204ENST00000391945 FLT3P36888 993 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms