RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 ZCCHC4Q9H5U6 513 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 PRDM16Q9HAZ2 1276 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 KMT5AQ9NQR1 393 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 ASAH2Q9NR71 780 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 MBNL3Q9NUK0 354 aaKnown RBP2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 TMEM74BQ9NUR3 256 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 DDX19AQ9NUU7 478 aaKnown RBP2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 TDP1Q9NUW8 608 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 PRMT7Q9NVM4 692 aaPredicted RBP2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 DUS2Q9NX74 493 aaKnown RBP2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 DPP3Q9NY33 737 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 BCCIPQ9P287 314 aaKnown RBP eCLIP2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 ANKFY1Q9P2R3 1169 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 MTRRQ9UBK8 725 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 LRWD1Q9UFC0 647 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 FBXW11Q9UKB1 542 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 KLK13Q9UKR3 277 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 KCNH3Q9ULD8 1083 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 DNM3Q9UQ16 869 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 CCL26Q9Y258 94 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 INSL5Q9Y5Q6 135 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 CNTNAP2Q9UHC6 1331 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 NUP210Q8TEM1 1887 aaPredicted RBP2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 TRPM6Q9BX84 2022 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 SDK2Q58EX2 2172 aa2.05□□□□□ -2.08
SNORA40.18-201ENST00000391200 IGSF10Q6WRI0 2623 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ITPR1Q14643 2758 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 MGAQ8IWI9 3026 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 SPEGQ15772 3267 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ESYT2A0FGR8 921 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ARHGEF37A1IGU5 675 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 BCLAF3A2AJT9 711 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 C2orf78A6NCI8 922 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TBC1D3BA6NDS4 549 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TRABD2BA6NFA1 517 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 MYMKA6NI61 221 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TISP43B9A030 160 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 hCG_1984214I3L0E3 225 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 K7EQS6 105 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 AGRPO00253 132 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CDX4O14627 284 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TRIM24O15164 1050 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CHADO15335 359 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 HCRTO43612 131 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 SH3BP5O60239 455 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ZFC3H1O60293 1989 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 NEMFO60524 1076 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ATG13O75143 517 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CLSTN1O94985 981 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 KIF20AO95235 890 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 LARGE1O95461 756 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 VNN2O95498 520 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 PRAMEF12O95522 483 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 KLF8O95600 359 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 KRT18P05783 430 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 KRT19P08727 400 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CXCL8P10145 99 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 IRF1P10914 325 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TDGF1P13385 188 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 PLCG1P19174 1290 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 BCKDHBP21953 392 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 LMO2P25791 158 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 RPL9P32969 192 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CNR2P34972 360 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 GJA4P35212 333 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 RDXP35241 583 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 AVPR1AP37288 418 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TXLNAP40222 546 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 MPLP40238 635 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 EIF2S3P41091 472 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 PTGER3P43115 390 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 NUMBP49757 651 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 EFNA5P52803 228 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ATXN3P54252 364 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 RP1P56715 2156 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 LILRA4P59901 499 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CREMQ03060 361 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CEBPZQ03701 1054 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 YWHAHQ04917 246 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 POU5F1BQ06416 359 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CYP4F3Q08477 520 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ZNF252P-AS1Q0IIN9 211 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 SCAPQ12770 1279 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ELAVL2Q12926 359 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 BFSP1Q12934 665 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 STRN3Q13033 797 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 NR1H3Q13133 447 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 MRPL58Q14197 206 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 LRRC32Q14392 662 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 DMC1Q14565 340 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 PTPAQ15257 358 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 SAFBQ15424 915 aaKnown RBP eCLIP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ELF2Q15723 593 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ME3Q16798 604 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 COL28A1Q2UY09 1125 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ZNF568Q3ZCX4 644 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 PLK5Q496M5 336 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ARHGAP29Q52LW3 1261 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 DGKKQ5KSL6 1271 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms