RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 PPP1R3BQ86XI6 285 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 COL23A1Q86Y22 540 aaPredicted RBP1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 ZNF280BQ86YH2 543 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 IZUMO1Q8IYV9 350 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 CPA6Q8N4T0 437 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 MAFAQ8NHW3 353 aaPredicted RBP1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 TUBB6Q9BUF5 446 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 SCNM1Q9BWG6 230 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 GATA5Q9BWX5 397 aaPredicted RBP1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 RMI1Q9H9A7 625 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 CD93Q9NPY3 652 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 TMEM45AQ9NWC5 275 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 SERPINB13Q9UIV8 391 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 COG5Q9UP83 839 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 WASHC2AQ641Q2 1341 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 KIF26BQ2KJY2 2108 aa1.9□□□□□ -2.1
RNU6-239P-201ENST00000390990 A0A1W2PPC1 479 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 E9PSI1 815 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 K7ESF4 209 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 RPLP2P05387 115 aaKnown RBP1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 ACAA1P09110 424 aaPredicted RBP1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 FTH1P19P0C7X4 201 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 PHKG2P15735 406 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 GKP32189 559 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 POLD2P49005 469 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 ENTPD1P49961 510 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 HSF1Q00613 529 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 EXOSC9Q06265 439 aaKnown RBP1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 SLC14A1Q13336 389 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 KLF1Q13351 362 aaPredicted RBP1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 ZIK1Q3SY52 487 aaPredicted RBP1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 NADSYN1Q6IA69 706 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 AFAP1L2Q8N4X5 818 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 TMEM199Q8N511 208 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 PCSK9Q8NBP7 692 aaKnown RBP1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 OIT3Q8WWZ8 545 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 MSI2Q96DH6 328 aaKnown RBP1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 RSPRY1Q96DX4 576 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 DECR2Q9NUI1 292 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 GAR1Q9NY12 217 aaKnown RBP1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 DNMT3BQ9UBC3 853 aaKnown RBP1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 PCDHA12Q9UN75 941 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 MMP24Q9Y5R2 645 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 CFAP20Q9Y6A4 193 aaKnown RBP1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 NOTCH2Q04721 2471 aa1.9□□□□□ -2.11
RNU6-239P-201ENST00000390990 C2CD4BA6NLJ0 364 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 PODXLO00592 558 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 SPTLC2O15270 562 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 GPR39O43194 453 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 SPRY2O43597 315 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 TLX3O43711 291 aaPredicted RBP1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 PCDHGA12O60330 932 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 UNC5CO95185 931 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 UMODP07911 640 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 HDCP19113 662 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 ALDH7A1P49419 539 aaKnown RBP1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 COMPP49747 757 aaPredicted RBP1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 TAF6P49848 677 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 DSCR9P59020 149 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 KIF23Q02241 960 aaPredicted RBP1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 KCNB1Q14721 858 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 ACAP2Q15057 778 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 NUGGCQ68CJ6 796 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 PTCHD4Q6ZW05 846 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 SPEM1Q8N4L4 309 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 C3orf20Q8ND61 904 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 CTHRC1Q96CG8 243 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 TRMT61AQ96FX7 289 aaKnown RBP1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 PUS7Q96PZ0 661 aaKnown RBP1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 C17orf80Q9BSJ5 609 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 WDCPQ9H6R7 721 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 ZNF556Q9HAH1 456 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 MLXIPLQ9NP71 852 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 MSRB1Q9NZV6 116 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 ABCF2Q9UG63 623 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 PCDHGA9Q9Y5G4 932 aaKnown RBP1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 PCDHGA8Q9Y5G5 932 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 PCDHGA7Q9Y5G6 932 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 PCDHGA6Q9Y5G7 932 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 PCDHGA3Q9Y5H0 932 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 PCDHA1Q9Y5I3 950 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 MRPL42Q9Y6G3 142 aaKnown RBP1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 FER1L4A9Z1Z3 1794 aa1.89□□□□□ -2.11
RNU6-239P-201ENST00000390990 SCN5AQ14524 2016 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 CLIC1O00299 241 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 LDB3O75112 727 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 KCNA3P22001 575 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 MLH1P40692 756 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 VIPR2P41587 438 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 CXCR3P49682 368 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 DGKEP52429 567 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 GYS2P54840 703 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 SUMO2P61956 95 aaKnown RBP1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 PTGR1Q14914 329 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 MLC1Q15049 377 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 INAVAQ3KP66 663 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 AMOTQ4VCS5 1084 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 FAM76BQ5HYJ3 339 aa1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 CC2D1BQ5T0F9 858 aaKnown RBP1.88□□□□□ -2.11
RNU6-239P-201ENST00000390990 LCE3AQ5TA76 89 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms