RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 MAK16Q9BXY0 300 aaKnown RBP26.36■■□□□ 1.81
SHOX2-201ENST00000389589 CACNG4Q9UBN1 327 aa26.36■■□□□ 1.81
SHOX2-201ENST00000389589 ARSEP51690 589 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 CDH6P55285 790 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 IFFO1Q0D2I5 559 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 TRMT10CQ7L0Y3 403 aaKnown RBP26.35■■□□□ 1.81
SHOX2-201ENST00000389589 OR2W6PQ8NHA6 318 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 KCTD13Q8WZ19 329 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 HAUS1Q96CS2 278 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 UROC1Q96N76 676 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 EPB41L4BQ9H329 900 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 CASTOR2A6NHX0 329 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 APOC4-APOC2K7ER74 178 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 APOC2P02655 101 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 CKBP12277 381 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 PRMT2P55345 433 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 DYNLT1P63172 113 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 OTUD4Q01804 1114 aaKnown RBP26.35■■□□□ 1.81
SHOX2-201ENST00000389589 TFDP2Q14188 446 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 MDH1BQ5I0G3 518 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 LHX8Q68G74 356 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 PIGZQ86VD9 579 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 C3orf58Q8NDZ4 430 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 ACTL9Q8TC94 416 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 SYT15Q9BQS2 421 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 MED10Q9BTT4 135 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 FOXP3Q9BZS1 431 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 CDH9Q9ULB4 789 aa26.35■■□□□ 1.81
SHOX2-201ENST00000389589 CENPFP49454 3210 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 IGFBP6P24592 240 aaPredicted RBP26.34■■□□□ 1.81
SHOX2-201ENST00000389589 VPS41P49754 854 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 DMTNQ08495 405 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 IZUMO3Q5VZ72 239 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 SCYL2Q6P3W7 929 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 CEP128Q6ZU80 1094 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 PAQR9Q6ZVX9 377 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 ECHDC2Q86YB7 292 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 SLC43A3Q8NBI5 491 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 CLEC4CQ8WTT0 213 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 CENPIQ92674 756 aaPredicted RBP26.34■■□□□ 1.81
SHOX2-201ENST00000389589 C11orf84Q9BUA3 381 aaPredicted RBP26.34■■□□□ 1.81
SHOX2-201ENST00000389589 TSC2P49815 1807 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 MDM4O15151 490 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 ODC1P11926 461 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 KRT81Q14533 505 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 CROCCP2Q86T23 111 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 DDX23Q9BUQ8 820 aaKnown RBP26.34■■□□□ 1.81
SHOX2-201ENST00000389589 SEMA4AQ9H3S1 761 aa26.34■■□□□ 1.81
SHOX2-201ENST00000389589 DNAH12Q6ZR08 3092 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 A0A1W2PQ45 241 aaPredicted RBP26.33■■□□□ 1.81
SHOX2-201ENST00000389589 A0A1W2PQY0 241 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 FAM200BP0CF97 657 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 PCSK1P29120 753 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 LMAN1P49257 510 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 TUSC3Q13454 348 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 DPYSL3Q14195 570 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 RAB6CQ53S08 254 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 AGBL2Q5U5Z8 902 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 ZNF771Q7L3S4 317 aaPredicted RBP26.33■■□□□ 1.81
SHOX2-201ENST00000389589 ZNF598Q86UK7 904 aaKnown RBP26.33■■□□□ 1.81
SHOX2-201ENST00000389589 RAB6CQ9H0N0 254 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 PCDH9Q9HC56 1237 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 CRTAC1Q9NQ79 661 aa26.33■■□□□ 1.81
SHOX2-201ENST00000389589 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.33■■□□□ 1.81
SHOX2-201ENST00000389589 INPPL1O15357 1258 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 POMCP01189 267 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 HDAC4P56524 1084 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 P3H1Q32P28 736 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 KIAA0319Q5VV43 1072 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 KCTD16Q68DU8 428 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 HOOK3Q86VS8 718 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 CCDC25Q86WR0 208 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 TRPV6Q9H1D0 765 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 STARD7Q9NQZ5 370 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 AAASQ9NRG9 546 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 RGS18Q9NS28 235 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 PTCH2Q9Y6C5 1203 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 ZNF487B1APH4 448 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 SGK1O00141 431 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 CLDN5O00501 218 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 FKTNO75072 461 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 TIGD5Q53EQ6 642 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 HIBCHQ6NVY1 386 aaPredicted RBP26.32■■□□□ 1.8
SHOX2-201ENST00000389589 CLEC20AQ6ZU45 233 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 METTL23Q86XA0 190 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 LRRC4Q9HBW1 653 aa26.32■■□□□ 1.8
SHOX2-201ENST00000389589 DNALI1O14645 258 aaPredicted RBP26.31■■□□□ 1.8
SHOX2-201ENST00000389589 RIPK2O43353 540 aa26.31■■□□□ 1.8
SHOX2-201ENST00000389589 ADIGQ0VDE8 80 aa26.31■■□□□ 1.8
SHOX2-201ENST00000389589 SLC29A2Q14542 456 aa26.31■■□□□ 1.8
SHOX2-201ENST00000389589 STRADAQ7RTN6 431 aa26.31■■□□□ 1.8
SHOX2-201ENST00000389589 RNF157Q96PX1 679 aa26.31■■□□□ 1.8
SHOX2-201ENST00000389589 PAAF1Q9BRP4 392 aa26.31■■□□□ 1.8
SHOX2-201ENST00000389589 TMEM121Q9BTD3 319 aa26.31■■□□□ 1.8
SHOX2-201ENST00000389589 DSEQ9UL01 958 aa26.31■■□□□ 1.8
SHOX2-201ENST00000389589 EOMESO95936 686 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 MATKP42679 507 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 KRT71Q3SY84 523 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 EMC10Q5UCC4 262 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms