RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TATDN1Q6P1N9 297 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 ALLCQ8N6M5 410 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 USP6NLQ92738 828 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 DCUN1D1Q96GG9 259 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 Q9H521 79 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 PLGRKTQ9HBL7 147 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 NYAP2Q9P242 653 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 SERPINA10Q9UK55 444 aa15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 HEMK1Q9Y5R4 338 aaPredicted RBP15.26■□□□□ 0.03
VPS9D1-201ENST00000389386 GOLGA8SH3BPF8 625 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 GOLGA8MH3BSY2 632 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 P4HA2O15460 535 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 SERPINA6P08185 405 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 COL6A2P12110 1019 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 HALP42357 657 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 PRELPP51888 382 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 EPHB1P54762 984 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 CREB5Q02930 508 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 HIF1AQ16665 826 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 TMEM53Q6P2H8 277 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 DHRS4L2Q6PKH6 230 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 ATP11CQ8NB49 1132 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 TTC13Q8NBP0 860 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 PYROXD1Q8WU10 500 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 DDX1Q92499 740 aaKnown RBP15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 SHC3Q92529 594 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 AGAP3Q96P47 875 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 PRPF18Q99633 342 aaKnown RBP15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 TMEM117Q9H0C3 514 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 UNC45AQ9H3U1 944 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 APPL1Q9UKG1 709 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 TMED5Q9Y3A6 229 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 NR2E3Q9Y5X4 410 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 MYOCOSA0A1B0GUC4 107 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 I3L4J1 428 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 CRTAMO95727 393 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 ACADVLP49748 655 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 CCR3P51677 355 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 NAA20P61599 178 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 UBXN2AP68543 259 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 PFKPQ01813 784 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 CDK18Q07002 472 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 BST1Q10588 318 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 SPIDRQ14159 915 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 GK3PQ14409 553 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 MSS51Q4VC12 460 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 C1orf220Q5T0J3 134 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 CES4AQ5XG92 561 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 RSBN1LQ6PCB5 846 aaPredicted RBP15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 IYDQ6PHW0 289 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 KATNAL2Q8IYT4 538 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 HIPK4Q8NE63 616 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 JDP2Q8WYK2 163 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 ACAP3Q96P50 834 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 HNRNPABQ99729 332 aaKnown RBP15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 ZNF395Q9H8N7 513 aaPredicted RBP15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 PARVGQ9HBI0 331 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 ZNRF3Q9ULT6 936 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 RAB26Q9ULW5 256 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 TMEM98Q9Y2Y6 226 aa15.25■□□□□ 0.03
VPS9D1-201ENST00000389386 UBE4BO95155 1302 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 NAT1P18440 290 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 TAS2R40P59535 323 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 GAD2Q05329 585 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 CIAPIN1Q6FI81 312 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 C1orf186Q6ZWK4 172 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 KBTBD6Q86V97 674 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 OGFOD1Q8N543 542 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 POU5F2Q8N7G0 328 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 GIPC3Q8TF64 312 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 KCNN1Q92952 543 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 MPHOSPH6Q99547 160 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 WDR83Q9BRX9 315 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.24■□□□□ 0.035e-7■■■■■ 50.5
VPS9D1-201ENST00000389386 SPON1Q9HCB6 807 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 POMPQ9Y244 141 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 HBS1LQ9Y450 684 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 GREB1LQ9C091 1923 aaPredicted RBP15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 ZNFX1Q9P2E3 1918 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 PSTPIP1O43586 416 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 PROSCO94903 275 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 ATP5BP06576 529 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 SRGAP2CP0DJJ0 459 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 SRGAP2BP0DMP2 458 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 CD58P19256 250 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 VAMP7P51809 220 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 DRICH1Q6PGQ1 229 aaPredicted RBP15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 POTEHQ6S545 545 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 RHOT1Q8IXI2 618 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 VPS50Q96JG6 964 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 BIRC8Q96P09 236 aa15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 AVENQ9NQS1 362 aaPredicted RBP15.24■□□□□ 0.03
VPS9D1-201ENST00000389386 SF3B1O75533 1304 aaKnown RBP eCLIP15.24■□□□□ 0.036e-8■■■■■ 80.2
VPS9D1-201ENST00000389386 SDR42E2A6NKP2 422 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 ITM2AO43736 263 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 PDGFRBP09619 1106 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 POLR2MP0CAP2 368 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 STT3AP46977 705 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 HDAC4P56524 1084 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms