RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 DCAKDQ8WVC6 231 aa15.61■□□□□ 0.09
SCFD2-201ENST00000388940 RMDN2Q96LZ7 410 aa15.61■□□□□ 0.09
SCFD2-201ENST00000388940 TBCBQ99426 244 aa15.61■□□□□ 0.09
SCFD2-201ENST00000388940 PAFAH2Q99487 392 aa15.61■□□□□ 0.09
SCFD2-201ENST00000388940 FRMD8Q9BZ67 464 aaPredicted RBP15.61■□□□□ 0.09
SCFD2-201ENST00000388940 TUT1Q9H6E5 874 aaKnown RBP15.61■□□□□ 0.09
SCFD2-201ENST00000388940 RNF181Q9P0P0 153 aa15.61■□□□□ 0.09
SCFD2-201ENST00000388940 GRID1Q9ULK0 1009 aa15.61■□□□□ 0.09
SCFD2-201ENST00000388940 PHTF1Q9UMS5 762 aa15.61■□□□□ 0.09
SCFD2-201ENST00000388940 ZNF487B1APH4 448 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 CHADO15335 359 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 HOXD8P13378 290 aaPredicted RBP15.6■□□□□ 0.09
SCFD2-201ENST00000388940 NQO1P15559 274 aaKnown RBP15.6■□□□□ 0.09
SCFD2-201ENST00000388940 TGM2P21980 687 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 ADORA2AP29274 412 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 GOLGA7BQ2TAP0 167 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 BBS9Q3SYG4 887 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 MARCH8Q5T0T0 291 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 TMEM110Q86TL2 294 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 ECHDC2Q86YB7 292 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 STK32AQ8WU08 396 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 SCN1AP35498 2009 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 CFAP69A5D8W1 941 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 STRNO43815 780 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 EDF1O60869 148 aaKnown RBP15.6■□□□□ 0.09
SCFD2-201ENST00000388940 SPAG6O75602 509 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 ZNF286BP0CG31 522 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 CYP2C8P10632 490 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 KRT4P19013 534 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 IL4RP24394 825 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 GBP2P32456 591 aaPredicted RBP15.6■□□□□ 0.09
SCFD2-201ENST00000388940 MSH2P43246 934 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 YARSP54577 528 aaKnown RBP15.6■□□□□ 0.09
SCFD2-201ENST00000388940 SNX16P57768 344 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 BASP1P80723 227 aaKnown RBP15.6■□□□□ 0.09
SCFD2-201ENST00000388940 SLC6A3Q01959 620 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 C15orf59Q2T9L4 293 aaPredicted RBP15.6■□□□□ 0.09
SCFD2-201ENST00000388940 HHATQ5VTY9 493 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 OLFML1Q6UWY5 402 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 NPNTQ6UXI9 565 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 ASRGL1Q7L266 308 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 APBB1IPQ7Z5R6 666 aaPredicted RBP15.6■□□□□ 0.09
SCFD2-201ENST00000388940 LRRC8CQ8TDW0 803 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 CYTH2Q99418 400 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 USP29Q9HBJ7 922 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 ARHGEF3Q9NR81 526 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.6■□□□□ 0.09
SCFD2-201ENST00000388940 PAK5Q9P286 719 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 GGT7Q9UJ14 662 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 TEX264Q9Y6I9 313 aa15.6■□□□□ 0.09
SCFD2-201ENST00000388940 TM9SF1O15321 606 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 CCNB1P14635 433 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 ADCYAP1R1P41586 468 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 SATB1Q01826 763 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 DNAJC3Q13217 504 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 EFTUD2Q15029 972 aaKnown RBP eCLIP15.59■□□□□ 0.09
SCFD2-201ENST00000388940 GRIK4Q16099 956 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 PPP1R26Q5T8A7 1209 aaPredicted RBP15.59■□□□□ 0.09
SCFD2-201ENST00000388940 PMF1Q6P1K2 205 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 FAM47EQ6ZV65 393 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 DPH6Q7L8W6 267 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 TBC1D1Q86TI0 1168 aaPredicted RBP15.59■□□□□ 0.09
SCFD2-201ENST00000388940 ZDHHC17Q8IUH5 632 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 PLD5Q8N7P1 536 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 SLC35F5Q8WV83 523 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 KHSRPQ92945 711 aaKnown RBP eCLIP15.59■□□□□ 0.094e-6■■□□□ 14.3
SCFD2-201ENST00000388940 PIWIL1Q96J94 861 aaKnown RBP15.59■□□□□ 0.09
SCFD2-201ENST00000388940 CD248Q9HCU0 757 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 PNPLA8Q9NP80 782 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 SLC45A1Q9Y2W3 748 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 USH1CQ9Y6N9 552 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 ATP6V1G2O95670 118 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 KRT81Q14533 505 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 ZBTB6Q15916 424 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 RAB6CQ53S08 254 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 SLC9A4Q6AI14 798 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 ZC3H18Q86VM9 953 aaKnown RBP15.59■□□□□ 0.09
SCFD2-201ENST00000388940 UNC93AQ86WB7 457 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 C12orf29Q8N999 325 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 BANPQ8N9N5 519 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.59■□□□□ 0.09
SCFD2-201ENST00000388940 FAF2Q96CS3 445 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 RAB6CQ9H0N0 254 aa15.59■□□□□ 0.09
SCFD2-201ENST00000388940 BCLAF3A2AJT9 711 aaKnown RBP15.58■□□□□ 0.08
SCFD2-201ENST00000388940 H7C0C1 242 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 APOL1O14791 398 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 MDM4O15151 490 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 SNAI1O95863 264 aaPredicted RBP15.58■□□□□ 0.08
SCFD2-201ENST00000388940 DESP17661 470 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 SLC8A1P32418 973 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 ELK3P41970 407 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 MAGEA6P43360 314 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 ATP5OP48047 213 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 CDC42EP1Q00587 391 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 ARHGAP17Q68EM7 881 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 LVRNQ6Q4G3 990 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 RPAINQ86UA6 219 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 SESTD1Q86VW0 696 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 TTC30AQ86WT1 665 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 PQLC3Q8N755 202 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms