RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 NXF1Q9UBU9 619 aaKnown RBP19■□□□□ 0.63
RPUSD3-201ENST00000383820 INVSQ9Y283 1065 aa19■□□□□ 0.63
RPUSD3-201ENST00000383820 C4orf47A7E2U8 309 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 K7ELQ4 463 aaPredicted RBP18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 CLDN5O00501 218 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 PHACTR2O75167 634 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 BCKDHBP21953 392 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 P2RY2P41231 377 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 KIR2DL1P43626 348 aaPredicted RBP18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 SLC6A11P48066 632 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 TUBP50607 506 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 GAD2Q05329 585 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 IFRD2Q12894 506 aaPredicted RBP18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 PREPLQ4J6C6 727 aaPredicted RBP18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 PSAPL1Q6NUJ1 521 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 ALLCQ8N6M5 410 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 TXNDC5Q8NBS9 432 aaKnown RBP18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 GOLGA5Q8TBA6 731 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 KCNV2Q8TDN2 545 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 WHAMMQ8TF30 809 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 FBXO32Q969P5 355 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 TNIP3Q96KP6 325 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 TMEM9BQ9NQ34 198 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 ARHGEF4Q9NR80 690 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 IL37Q9NZH6 218 aa18.99■□□□□ 0.63
RPUSD3-201ENST00000383820 ANTXRLA6NF34 631 aa18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 COCHO43405 550 aa18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 EXOC3O60645 756 aa18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 KLF8O95600 359 aaPredicted RBP18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 PDIA4P13667 645 aaKnown RBP18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 TIE1P35590 1138 aa18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 NOVA1P51513 510 aaKnown RBP18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 BYSLQ13895 437 aaKnown RBP18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 KNOP1Q1ED39 458 aaKnown RBP18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 SPDYCQ5MJ68 293 aa18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 HECTD3Q5T447 861 aa18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 FAM35AQ86V20 835 aa18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 C12orf40Q86WS4 652 aa18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 ZFRQ96KR1 1074 aaKnown RBP18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 SPACA7Q96KW9 195 aa18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 DMAP1Q9NPF5 467 aaPredicted RBP18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 FOXD4L1Q9NU39 408 aa18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 EVLQ9UI08 416 aaPredicted RBP18.98■□□□□ 0.63
RPUSD3-201ENST00000383820 FAM92AA1XBS5 289 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 SGK1O00141 431 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 TNFRSF10BO14763 440 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 POLR2DO15514 142 aaKnown RBP18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 HOXC11O43248 304 aaPredicted RBP18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 HNRNPLP14866 589 aaKnown RBP eCLIP18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 CSRP1P21291 193 aaKnown RBP18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 DPP6P42658 865 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 DHPSP49366 369 aaPredicted RBP18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 CLDN10P78369 228 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 MESP2Q0VG99 397 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 ZNF699Q32M78 642 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 ZNF667Q5HYK9 610 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 LY6G5CQ5SRR4 150 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 BTBD8Q5XKL5 378 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 LPCAT2Q7L5N7 544 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 ETFBKMTQ8IXQ9 262 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 PHTF2Q8N3S3 785 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 PARD3BQ8TEW8 1205 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 TMEM174Q8WUU8 243 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 SMARCD1Q96GM5 515 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 KCNK16Q96T55 309 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 SLC39A2Q9NP94 309 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 SH3BP1Q9Y3L3 701 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 PLXND1Q9Y4D7 1925 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 USP24Q9UPU5 2620 aa18.97■□□□□ 0.63
RPUSD3-201ENST00000383820 MYOFQ9NZM1 2061 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 CDX4O14627 284 aaPredicted RBP18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 SCAMP3O14828 347 aaKnown RBP18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 ZDHHC11BP0C7U3 371 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 SLC5A3P53794 718 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 BIRC3Q13489 604 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 NUDT18Q6ZVK8 323 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 PAQR9Q6ZVX9 377 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 TRMT11Q7Z4G4 463 aaKnown RBP18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 TTC30AQ86WT1 665 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 SFTPA1Q8IWL2 248 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 SCAMP5Q8TAC9 235 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 MED10Q9BTT4 135 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 BLZF1Q9H2G9 400 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 SMYD3Q9H7B4 428 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 FAM13BQ9NYF5 915 aa18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 CHORDC1Q9UHD1 332 aaPredicted RBP18.96■□□□□ 0.63
RPUSD3-201ENST00000383820 MAP3K13O43283 966 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 C4BPAP04003 597 aaKnown RBP18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 P4HA1P13674 534 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 CEACAM1P13688 526 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 CASP4P49662 377 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 CDH8P55286 799 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 IRX4P78413 519 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 KDSRQ06136 332 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 LMAN2Q12907 356 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 NCOA4Q13772 614 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 EMC10Q5UCC4 262 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 SLC9A9Q8IVB4 645 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 PLEKHO2Q8TD55 490 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 PIGKQ92643 395 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms