RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 PCSK1NQ9UHG2 260 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 TRDMT1O14717 391 aaKnown RBP13.2□□□□□ -0.3
PUDP-201ENST00000381077 CD48P09326 243 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 NQO1P15559 274 aaKnown RBP13.2□□□□□ -0.3
PUDP-201ENST00000381077 FOXN2P32314 431 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 NR2C2P49116 596 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 RPL34P49207 117 aaKnown RBP13.2□□□□□ -0.3
PUDP-201ENST00000381077 IGBP1P78318 339 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 SLC6A3Q01959 620 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 ZBTB6Q15916 424 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 DUSP28Q4G0W2 176 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 HHATQ5VTY9 493 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 MAP1SQ66K74 1059 aaPredicted RBP13.2□□□□□ -0.3
PUDP-201ENST00000381077 CGB2Q6NT52 195 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 DARS2Q6PI48 645 aaKnown RBP13.2□□□□□ -0.3
PUDP-201ENST00000381077 OLFML1Q6UWY5 402 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 CDR2LQ86X02 465 aaPredicted RBP13.2□□□□□ -0.3
PUDP-201ENST00000381077 BEST2Q8NFU1 509 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 MZB1Q8WU39 189 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 PEBP4Q96S96 227 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.2□□□□□ -0.3
PUDP-201ENST00000381077 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.2□□□□□ -0.3
PUDP-201ENST00000381077 HESX1Q9UBX0 185 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 ZNF180Q9UJW8 692 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 TEX264Q9Y6I9 313 aa13.2□□□□□ -0.3
PUDP-201ENST00000381077 E5RJQ4 531 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 APOL1O14791 398 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 XPOTO43592 962 aaKnown RBP13.19□□□□□ -0.3
PUDP-201ENST00000381077 TMEM63AO94886 807 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 PFKMP08237 780 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 FAM163BP0C2L3 166 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 ADORA2AP29274 412 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 SDC4P31431 198 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 ACADSBP45954 432 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 GTF2A1P52655 376 aaPredicted RBP13.19□□□□□ -0.3
PUDP-201ENST00000381077 KRT81Q14533 505 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 GRIK4Q16099 956 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 FNBP1LQ5T0N5 605 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 ANKRD22Q5VYY1 191 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 SLC27A1Q6PCB7 646 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 ASRGL1Q7L266 308 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 CHSY1Q86X52 802 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 PSTKQ8IV42 348 aaKnown RBP13.19□□□□□ -0.3
PUDP-201ENST00000381077 FAM71DQ8N9W8 422 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 SLC35F5Q8WV83 523 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 DCAKDQ8WVC6 231 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 SLC44A1Q8WWI5 657 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 CPB2Q96IY4 423 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 SNX27Q96L92 541 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 GCOM2Q9BZD3 368 aaPredicted RBP13.19□□□□□ -0.3
PUDP-201ENST00000381077 KLC2Q9H0B6 622 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 ECT2Q9H8V3 914 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 PHTF1Q9UMS5 762 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 UNC5CO95185 931 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 KRT4P19013 534 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 PNPLA4P41247 253 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 BASP1P80723 227 aaKnown RBP13.19□□□□□ -0.3
PUDP-201ENST00000381077 SEPT7Q16181 437 aaKnown RBP13.19□□□□□ -0.3
PUDP-201ENST00000381077 DGKDQ16760 1214 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 GOLGA7BQ2TAP0 167 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 CCDC14Q49A88 953 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 IQSEC1Q6DN90 963 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 DPY19L2Q6NUT2 758 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 SLC26A9Q7LBE3 791 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 CDKL3Q8IVW4 592 aaPredicted RBP13.19□□□□□ -0.3
PUDP-201ENST00000381077 FITM2Q8N6M3 262 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 PLD5Q8N7P1 536 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 RAB3IPQ96QF0 476 aaPredicted RBP13.19□□□□□ -0.3
PUDP-201ENST00000381077 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 RCOR3Q9P2K3 495 aaPredicted RBP13.19□□□□□ -0.3
PUDP-201ENST00000381077 SAE1Q9UBE0 346 aaPredicted RBP13.19□□□□□ -0.3
PUDP-201ENST00000381077 IKBKGQ9Y6K9 419 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 ZNF236Q9UL36 1845 aa13.19□□□□□ -0.3
PUDP-201ENST00000381077 ATP2C2O75185 946 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 ATP6V1G2O95670 118 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 CD4P01730 458 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 VTNP04004 478 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 CYP3A5P20815 502 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 SSTR1P30872 391 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 RPA3P35244 121 aaPredicted RBP13.18□□□□□ -0.3
PUDP-201ENST00000381077 RASSF2P50749 326 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 SLC18A2Q05940 514 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 DPYSL2Q16555 572 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 PARP6Q2NL67 630 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 FAM133BQ5BKY9 247 aaKnown RBP13.18□□□□□ -0.3
PUDP-201ENST00000381077 LGSNQ5TDP6 509 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 FYB2Q5VWT5 728 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 NOTUMQ6P988 496 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 CYS1Q717R9 158 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 BZW1Q7L1Q6 419 aaKnown RBP13.18□□□□□ -0.3
PUDP-201ENST00000381077 BANPQ8N9N5 519 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 CENPIQ92674 756 aaPredicted RBP13.18□□□□□ -0.3
PUDP-201ENST00000381077 INPP5DQ92835 1189 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 KLHL29Q96CT2 875 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 ZNF668Q96K58 619 aaPredicted RBP13.18□□□□□ -0.3
PUDP-201ENST00000381077 HSFY1Q96LI6 401 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 TMEM237Q96Q45 408 aa13.18□□□□□ -0.3
PUDP-201ENST00000381077 ABHD16BQ9H3Z7 469 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms