RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 STX12Q86Y82 276 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 ZNF333Q96JL9 665 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 RBBP8Q99708 897 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 TNFSF13BQ9Y275 285 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 PCDHB12Q9Y5F1 795 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 SMIM31A0A1B0GVY4 71 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 RHOCP08134 193 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 GRIK3Q13003 919 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 C12orf60Q5U649 245 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 FAM20AQ96MK3 541 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 TNKS2Q9H2K2 1166 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 TMA7Q9Y2S6 64 aaKnown RBP12.83□□□□□ -0.36
CHD3-203ENST00000380358 BAIAP3O94812 1187 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 SLC2A4P14672 509 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 TCF7P36402 384 aaPredicted RBP12.83□□□□□ -0.36
CHD3-203ENST00000380358 TAP1Q03518 808 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 CRYMQ14894 314 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 NOTUMQ6P988 496 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 PACS1Q6VY07 963 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 TAF8Q7Z7C8 310 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 ATP6V1C2Q8NEY4 427 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 ATL2Q8NHH9 583 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 HERC5Q9UII4 1024 aaKnown RBP12.83□□□□□ -0.36
CHD3-203ENST00000380358 GPSM3Q9Y4H4 160 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 OXCT1P55809 520 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 IL5RAQ01344 420 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 MTF1Q14872 753 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 EMBQ6PCB8 327 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 TRIM72Q6ZMU5 477 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 PALB2Q86YC2 1186 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 TNIP2Q8NFZ5 429 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 KCNS3Q9BQ31 491 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 WDR41Q9HAD4 459 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 PRODHO43272 600 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 TARSP26639 723 aaKnown RBP12.83□□□□□ -0.36
CHD3-203ENST00000380358 NFYCQ13952 458 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 FAM45BPQ6NSW5 357 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 CEP68Q76N32 757 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 EDEM1Q92611 657 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 OMA1Q96E52 524 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 LRRC1Q9BTT6 524 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 OXCT2Q9BYC2 517 aaPredicted RBP12.83□□□□□ -0.36
CHD3-203ENST00000380358 RGS12O14924 1447 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 CNTNAP2Q9UHC6 1331 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 SMIM22K7EJ46 135 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 PSMD14O00487 310 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 AREL1O15033 823 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 RTL3Q8N8U3 475 aaKnown RBP12.83□□□□□ -0.36
CHD3-203ENST00000380358 RIN2Q8WYP3 895 aaPredicted RBP12.83□□□□□ -0.36
CHD3-203ENST00000380358 STARD7Q9NQZ5 370 aa12.83□□□□□ -0.36
CHD3-203ENST00000380358 FAM25EA8MYX2 175 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 CYB561D2O14569 222 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 ZNF500O60304 480 aaPredicted RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 STAG3L1P0CL83 205 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 NPEPPSP55786 919 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 XRCC4Q13426 336 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 RAPSNQ13702 412 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 FAM228AQ86W67 206 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 USP13Q92995 863 aaPredicted RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 CELF6Q96J87 481 aaKnown RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 OMDQ99983 421 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 C6orf62Q9GZU0 229 aaPredicted RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 VAV1P15498 845 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 TTC23Q5W5X9 447 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 PCDHB9Q9Y5E1 797 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 SNX13Q9Y5W8 968 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 KPNA3O00505 521 aaPredicted RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 LTKP29376 864 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 ORC2Q13416 577 aaPredicted RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 SGSM1Q2NKQ1 1148 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 DENND1BQ6P3S1 775 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 LPCAT1Q8NF37 534 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 ERP27Q96DN0 273 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 STRBPQ96SI9 672 aaKnown RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 FICDQ9BVA6 458 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 TTC26A0AVF1 554 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 ADCY6O43306 1168 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 ACAT1P24752 427 aaKnown RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 GMPSP49915 693 aaPredicted RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 PTPN12Q05209 780 aaKnown RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 RESTQ13127 1097 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 NAA30Q147X3 362 aaPredicted RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 PDK1Q15118 436 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 CATSPER1Q8NEC5 780 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 SEPT1Q8WYJ6 367 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 ABCG8Q9H221 673 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 RPRD2Q5VT52 1461 aaKnown RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 HLA-DRAP01903 254 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 FAM83EQ2M2I3 478 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 ERMARDQ5T6L9 678 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 PPP1R26Q5T8A7 1209 aaPredicted RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 KIF24Q5T7B8 1368 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 PSMD11O00231 422 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 HNRNPRO43390 633 aaKnown RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 MTRF1O75570 445 aaKnown RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 PTPN1P18031 435 aaKnown RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 FBXO16Q8IX29 292 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms