RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 HNRNPLP14866 589 aaKnown RBP eCLIP24.55■■□□□ 1.52
U2AF1-202ENST00000380276 MESP2Q0VG99 397 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 SH3PXD2AQ5TCZ1 1133 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 BTBD8Q5XKL5 378 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 RHBDF2Q6PJF5 856 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 SCARA5Q6ZMJ2 495 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 LPCAT2Q7L5N7 544 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 IL17RCQ8NAC3 791 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 WHAMMQ8TF30 809 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 HMGB4Q8WW32 186 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 SYAP1Q96A49 352 aaPredicted RBP24.55■■□□□ 1.52
U2AF1-202ENST00000380276 NACA2Q9H009 215 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 BLZF1Q9H2G9 400 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 TBC1D14Q9P2M4 693 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 NUP205Q92621 2012 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 UBE4BO95155 1302 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.54■■□□□ 1.52
U2AF1-202ENST00000380276 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.54■■□□□ 1.52
U2AF1-202ENST00000380276 IRF1P10914 325 aa24.54■■□□□ 1.52
U2AF1-202ENST00000380276 EIF2DP41214 584 aaKnown RBP24.54■■□□□ 1.52
U2AF1-202ENST00000380276 LY6G5CQ5SRR4 150 aa24.54■■□□□ 1.52
U2AF1-202ENST00000380276 FOXD4L5Q5VV16 416 aaPredicted RBP24.54■■□□□ 1.52
U2AF1-202ENST00000380276 TMEFF1Q8IYR6 380 aa24.54■■□□□ 1.52
U2AF1-202ENST00000380276 NAT16Q8N8M0 369 aa24.54■■□□□ 1.52
U2AF1-202ENST00000380276 SCFD1Q8WVM8 642 aa24.54■■□□□ 1.52
U2AF1-202ENST00000380276 FOXD4L4Q8WXT5 416 aaPredicted RBP24.54■■□□□ 1.52
U2AF1-202ENST00000380276 INTS4Q96HW7 963 aaKnown RBP24.54■■□□□ 1.52
U2AF1-202ENST00000380276 SMYD3Q9H7B4 428 aa24.54■■□□□ 1.52
U2AF1-202ENST00000380276 CHORDC1Q9UHD1 332 aaPredicted RBP24.54■■□□□ 1.52
U2AF1-202ENST00000380276 TCRBV21S2A2A0A5A6 115 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 COCHO43405 550 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 EXOC3O60645 756 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 PPP6R2O75170 966 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 FAM163BP0C2L3 166 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 CASP1P29466 404 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 ATICP31939 592 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 GRIA2P42262 883 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 CASP4P49662 377 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 IRX4P78413 519 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 GAD2Q05329 585 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 ZNF699Q32M78 642 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 HECTD3Q5T447 861 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 UNC13DQ70J99 1090 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 FAM35AQ86V20 835 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 KIAA1958Q8N8K9 716 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 ZNF516Q92618 1163 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 KCNK16Q96T55 309 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 SLC39A2Q9NP94 309 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 ABCA7Q8IZY2 2146 aa24.53■■□□□ 1.52
U2AF1-202ENST00000380276 E2F8A0AVK6 867 aa24.52■■□□□ 1.52
U2AF1-202ENST00000380276 TBC1D3BA6NDS4 549 aa24.52■■□□□ 1.52
U2AF1-202ENST00000380276 CUTAO60888 179 aa24.52■■□□□ 1.52
U2AF1-202ENST00000380276 P2RY2P41231 377 aa24.52■■□□□ 1.52
U2AF1-202ENST00000380276 CDH8P55286 799 aa24.52■■□□□ 1.52
U2AF1-202ENST00000380276 SNRPFP62306 86 aaKnown RBP24.52■■□□□ 1.52
U2AF1-202ENST00000380276 ANO4Q32M45 955 aa24.52■■□□□ 1.52
U2AF1-202ENST00000380276 FOXD4L6Q3SYB3 417 aaPredicted RBP24.52■■□□□ 1.52
U2AF1-202ENST00000380276 HSF5Q4G112 596 aaPredicted RBP24.52■■□□□ 1.52
U2AF1-202ENST00000380276 TRIM61Q5EBN2 209 aa24.52■■□□□ 1.52
U2AF1-202ENST00000380276 FOXD4L3Q6VB84 417 aaPredicted RBP24.52■■□□□ 1.52
U2AF1-202ENST00000380276 FRMD1Q8N878 549 aa24.52■■□□□ 1.52
U2AF1-202ENST00000380276 SCAMP5Q8TAC9 235 aa24.52■■□□□ 1.52
U2AF1-202ENST00000380276 C7orf25Q9BPX7 421 aa24.52■■□□□ 1.52
U2AF1-202ENST00000380276 NUSAP1Q9BXS6 441 aaKnown RBP24.52■■□□□ 1.52
U2AF1-202ENST00000380276 ATXN2Q99700 1313 aaKnown RBP24.52■■□□□ 1.52
U2AF1-202ENST00000380276 CNOT1A5YKK6 2376 aaKnown RBP24.51■■□□□ 1.51
U2AF1-202ENST00000380276 MAPK8P45983 427 aa24.51■■□□□ 1.51
U2AF1-202ENST00000380276 SLC5A3P53794 718 aa24.51■■□□□ 1.51
U2AF1-202ENST00000380276 ZNF667Q5HYK9 610 aa24.51■■□□□ 1.51
U2AF1-202ENST00000380276 SHC4Q6S5L8 630 aa24.51■■□□□ 1.51
U2AF1-202ENST00000380276 OLIG1Q8TAK6 271 aa24.51■■□□□ 1.51
U2AF1-202ENST00000380276 OVCA2Q8WZ82 227 aa24.51■■□□□ 1.51
U2AF1-202ENST00000380276 ELMO3Q96BJ8 720 aa24.51■■□□□ 1.51
U2AF1-202ENST00000380276 CCSER2Q9H7U1 834 aa24.51■■□□□ 1.51
U2AF1-202ENST00000380276 DMAP1Q9NPF5 467 aaPredicted RBP24.51■■□□□ 1.51
U2AF1-202ENST00000380276 GMIPQ9P107 970 aa24.51■■□□□ 1.51
U2AF1-202ENST00000380276 POLR2DO15514 142 aaKnown RBP24.5■■□□□ 1.51
U2AF1-202ENST00000380276 STAU1O95793 577 aaKnown RBP24.5■■□□□ 1.51
U2AF1-202ENST00000380276 SPINK2P20155 84 aa24.5■■□□□ 1.51
U2AF1-202ENST00000380276 TNFRSF4P43489 277 aa24.5■■□□□ 1.51
U2AF1-202ENST00000380276 KIR2DL1P43626 348 aaPredicted RBP24.5■■□□□ 1.51
U2AF1-202ENST00000380276 AFMP43652 599 aa24.5■■□□□ 1.51
U2AF1-202ENST00000380276 BYSLQ13895 437 aaKnown RBP24.5■■□□□ 1.51
U2AF1-202ENST00000380276 TNIP3Q96KP6 325 aa24.5■■□□□ 1.51
U2AF1-202ENST00000380276 XYLT2Q9H1B5 865 aa24.5■■□□□ 1.51
U2AF1-202ENST00000380276 CHD8Q9HCK8 2581 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 MYOFQ9NZM1 2061 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 CDX4O14627 284 aaPredicted RBP24.49■■□□□ 1.51
U2AF1-202ENST00000380276 AP1G2O75843 785 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 YEATS4O95619 227 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 WASP42768 502 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 PTGER3P43115 390 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 LMAN2Q12907 356 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 PREPLQ4J6C6 727 aaPredicted RBP24.49■■□□□ 1.51
U2AF1-202ENST00000380276 C10orf76Q5T2E6 689 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 LYSMD4Q5XG99 296 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 BBS7Q8IWZ6 715 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 ZNF513Q8N8E2 541 aaPredicted RBP24.49■■□□□ 1.51
U2AF1-202ENST00000380276 DEFB124Q8NES8 71 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 OTUB2Q96DC9 234 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms