RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 DPEP3Q9H4B8 488 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 OLFML3Q9NRN5 406 aa18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 FBXO2Q9UK22 296 aaPredicted RBP18.94■□□□□ 0.62
PDLIM4-202ENST00000379018 ZNF233A6NK53 670 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 CLDN5O00501 218 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 DLATP10515 647 aaKnown RBP18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 GNL1P36915 607 aaPredicted RBP18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 KIR2DL1P43626 348 aaPredicted RBP18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 ALCAMQ13740 583 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 BYSLQ13895 437 aaKnown RBP18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 DUOXA2Q1HG44 320 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 ANO4Q32M45 955 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 C8orf34Q49A92 452 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 ZNF513Q8N8E2 541 aaPredicted RBP18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 RDH13Q8NBN7 331 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 SPRYD3Q8NCJ5 442 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 GLIS3Q8NEA6 775 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 HPS3Q969F9 1004 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 FBXO32Q969P5 355 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 PILRBQ9UKJ0 227 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 LHX6Q9UPM6 363 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 SH3BP1Q9Y3L3 701 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 NEUROG3Q9Y4Z2 214 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 NME7Q9Y5B8 376 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 PKD1L2Q7Z442 2459 aa18.93■□□□□ 0.62
PDLIM4-202ENST00000379018 PLXND1Q9Y4D7 1925 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 AP5Z1O43299 807 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 OLFM2O95897 454 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 EIF2DP41214 584 aaKnown RBP18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 PPP3CCP48454 512 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 NOP14P78316 857 aaKnown RBP18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 GFPT1Q06210 699 aaPredicted RBP18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 RING1Q06587 406 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 HSF5Q4G112 596 aaPredicted RBP18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 C10orf76Q5T2E6 689 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 BTBD8Q5XKL5 378 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 SLC23A3Q6PIS1 610 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 DDX42Q86XP3 938 aaKnown RBP eCLIP18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 C8orf48Q96LL4 319 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 TMEM30AQ9NV96 361 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 CALCOCO1Q9P1Z2 691 aa18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.92■□□□□ 0.62
PDLIM4-202ENST00000379018 OPHN1O60890 802 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 CHRM1P11229 460 aaPredicted RBP18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 HOXB2P14652 356 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 PTPN1P18031 435 aaKnown RBP18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 TNNI1P19237 187 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 YWHAQP27348 245 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 TNFRSF4P43489 277 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 TNNC1P63316 161 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 FAM193AP78312 1265 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 GAD2Q05329 585 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 SURF1Q15526 300 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 DUOXA1Q1HG43 343 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 FAM173BQ6P4H8 233 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 CCDC73Q6ZRK6 1079 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 TRAPPC11Q7Z392 1133 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 LIMS2Q7Z4I7 341 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 CHCHD4Q8N4Q1 142 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 PDILTQ8N807 584 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 HSPBP1Q9NZL4 362 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 TBC1D14Q9P2M4 693 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 SLC6A14Q9UN76 642 aa18.91■□□□□ 0.62
PDLIM4-202ENST00000379018 A0A087X0B3 334 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 TRIM24O15164 1050 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 COCHO43405 550 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 GABRG2P18507 467 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 DPP6P42658 865 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 SEMA3BQ13214 749 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 WDR72Q3MJ13 1102 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 PIP4P1Q86T03 277 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 WDR49Q8IV35 697 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 BBS7Q8IWZ6 715 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 CCDC65Q8IXS2 484 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 MINDY1Q8N5J2 469 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 CCDC127Q96BQ5 260 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 CEP295NLQ96MC4 621 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 MED10Q9BTT4 135 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 B3GNT5Q9BYG0 378 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 ELOVL4Q9GZR5 314 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 NACA2Q9H009 215 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 CCSER2Q9H7U1 834 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 DEC1Q9P2X7 70 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 NXF1Q9UBU9 619 aaKnown RBP18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 CHORDC1Q9UHD1 332 aaPredicted RBP18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 CYP8B1Q9UNU6 501 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 MSRB2Q9Y3D2 182 aa18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 SRPRBQ9Y5M8 271 aaKnown RBP18.9■□□□□ 0.62
PDLIM4-202ENST00000379018 FRMD3A2A2Y4 597 aa18.89■□□□□ 0.61
PDLIM4-202ENST00000379018 A8MXQ7 604 aa18.89■□□□□ 0.61
PDLIM4-202ENST00000379018 TULP3O75386 442 aa18.89■□□□□ 0.61
PDLIM4-202ENST00000379018 CST3P01034 146 aaPredicted RBP18.89■□□□□ 0.61
PDLIM4-202ENST00000379018 RDXP35241 583 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-202ENST00000379018 ZNF33AQ06730 810 aa18.89■□□□□ 0.61
PDLIM4-202ENST00000379018 ACAP1Q15027 740 aa18.89■□□□□ 0.61
PDLIM4-202ENST00000379018 STXBP4Q6ZWJ1 553 aa18.89■□□□□ 0.61
PDLIM4-202ENST00000379018 TRMT11Q7Z4G4 463 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-202ENST00000379018 NUP93Q8N1F7 819 aa18.89■□□□□ 0.61
PDLIM4-202ENST00000379018 PHTF2Q8N3S3 785 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms