RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PKN3Q6P5Z2 889 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 PRR23CQ6ZRP0 262 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 WDR5BQ86VZ2 330 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 CBWD2Q8IUF1 395 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 FAM160A2Q8N612 972 aaPredicted RBP14.61□□□□□ -0.07
PRPF18-202ENST00000378572 OR5B17Q8NGF7 314 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 NETO1Q8TDF5 533 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 FAM83CQ9BQN1 747 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 GDAP2Q9NXN4 497 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 IMPACTQ9P2X3 320 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 WNT6Q9Y6F9 365 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 DNAH14Q0VDD8 3507 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 NCOR2Q9Y618 2525 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 GOLGA6L6A8MZA4 724 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 LRP3O75074 770 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 TADA3O75528 432 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 RPP40O75818 363 aaKnown RBP14.6□□□□□ -0.07
PRPF18-202ENST00000378572 EGFP01133 1207 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 GRIK1P39086 918 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 UBXN1Q04323 297 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 SNRNP35Q16560 246 aaKnown RBP14.6□□□□□ -0.07
PRPF18-202ENST00000378572 DUOXA2Q1HG44 320 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 SOWAHAQ2M3V2 549 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 AASDHQ4L235 1098 aaPredicted RBP14.6□□□□□ -0.07
PRPF18-202ENST00000378572 TMEM196Q5HYL7 178 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 FKBP15Q5T1M5 1219 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 DRC7Q8IY82 874 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 RDH13Q8NBN7 331 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 SPATA18Q8TC71 538 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 SLC35C1Q96A29 364 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 TRMT2BQ96GJ1 504 aaKnown RBP14.6□□□□□ -0.07
PRPF18-202ENST00000378572 FUBP3Q96I24 572 aaKnown RBP eCLIP14.6□□□□□ -0.07
PRPF18-202ENST00000378572 ERGIC2Q96RQ1 377 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 FNBP1Q96RU3 617 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 P2RY13Q9BPV8 354 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 SNX25Q9H3E2 840 aa14.6□□□□□ -0.07
PRPF18-202ENST00000378572 PTPRJQ12913 1337 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 DENND4CQ5VZ89 1909 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 OTOL1A6NHN0 477 aaPredicted RBP14.59□□□□□ -0.07
PRPF18-202ENST00000378572 AXIN1O15169 862 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 ATP2C2O75185 946 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 PDGFRBP09619 1106 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 KRT13P13646 458 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 TNNI1P19237 187 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 TGM1P22735 817 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 ZNF268Q14587 947 aaPredicted RBP14.59□□□□□ -0.07
PRPF18-202ENST00000378572 CSRP2Q16527 193 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 CFAP221Q4G0U5 840 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 SPECC1LQ69YQ0 1117 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 ARL14EPQ8N8R7 260 aaPredicted RBP14.59□□□□□ -0.07
PRPF18-202ENST00000378572 C12orf50Q8NA57 414 aaPredicted RBP14.59□□□□□ -0.07
PRPF18-202ENST00000378572 RIN3Q8TB24 985 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 ATP2A3Q93084 1043 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 CCDC127Q96BQ5 260 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 CHFRQ96EP1 664 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 HHIPQ96QV1 700 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 CYP2S1Q96SQ9 504 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 CDH9Q9ULB4 789 aa14.59□□□□□ -0.07
PRPF18-202ENST00000378572 ABL1P00519 1130 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 AFPP02771 609 aaKnown RBP14.58□□□□□ -0.07
PRPF18-202ENST00000378572 DRD1P21728 446 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 BDNFP23560 247 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 TNNC1P63316 161 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 KCNH2Q12809 1159 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 IFRD2Q12894 506 aaPredicted RBP14.58□□□□□ -0.07
PRPF18-202ENST00000378572 MAPRE1Q15691 268 aaKnown RBP14.58□□□□□ -0.07
PRPF18-202ENST00000378572 CCDC6Q16204 474 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 WDR49Q8IV35 697 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 TMC2Q8TDI7 906 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 SH3RF2Q8TEC5 729 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 OSCP1Q8WVF1 389 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 SLC22A12Q96S37 553 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 PKMYT1Q99640 499 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 ECT2Q9H8V3 914 aa14.58□□□□□ -0.07
PRPF18-202ENST00000378572 GTPBP10A4D1E9 387 aaKnown RBP14.58□□□□□ -0.08
PRPF18-202ENST00000378572 C2orf78A6NCI8 922 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 SOBPA7XYQ1 873 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 PES1O00541 588 aaKnown RBP14.58□□□□□ -0.08
PRPF18-202ENST00000378572 TRDMT1O14717 391 aaKnown RBP14.58□□□□□ -0.08
PRPF18-202ENST00000378572 GJA4P35212 333 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 PDE6CP51160 858 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 GALK1P51570 392 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 USP4Q13107 963 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 NR1H3Q13133 447 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 ZNF77Q15935 545 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 MDH1BQ5I0G3 518 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 NAIF1Q69YI7 327 aaPredicted RBP14.58□□□□□ -0.08
PRPF18-202ENST00000378572 IL31Q6EBC2 164 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 RALGAPA1Q6GYQ0 2036 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 CACNA2D4Q7Z3S7 1137 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 TMC6Q7Z403 805 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 OR6B3Q8NGW1 331 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 RPLP0P6Q8NHW5 317 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 CXorf38Q8TB03 319 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 GAB3Q8WWW8 586 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 CD101Q93033 1021 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 IQCDQ96DY2 449 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 MYRFLQ96LU7 910 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 ARRDC1-AS1Q9H2J1 176 aa14.58□□□□□ -0.08
PRPF18-202ENST00000378572 POLR3BQ9NW08 1133 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms