RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 TSC22D2O75157 780 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 RPS12P25398 132 aaKnown RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 CASP4P49662 377 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 NBPF12Q5TAG4 269 aaPredicted RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 SLFN11Q7Z7L1 901 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 ZDHHC6Q9H6R6 413 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 HMX1Q9NP08 348 aaPredicted RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 DDX43Q9NXZ2 648 aaKnown RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 MYMKA6NI61 221 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 CPA2P48052 419 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 CUL4AQ13619 759 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 NLRP14Q86W24 1093 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 TRPC4APQ8TEL6 797 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 XPNPEP3Q9NQH7 507 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 PDGFCQ9NRA1 345 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 TGM3Q08188 693 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 PREPLQ4J6C6 727 aaPredicted RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 SCARA3Q6AZY7 606 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 FAM124AQ86V42 546 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 GUF1Q8N442 669 aaKnown RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 MTG1Q9BT17 334 aaPredicted RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 GLIS2Q9BZE0 524 aaPredicted RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 GALNT8Q9NY28 637 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 PSMC3IPQ9P2W1 217 aaPredicted RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 CLTCQ00610 1675 aaKnown RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 IQCMA0A1B0GVH7 501 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 KIAA0391O15091 583 aaKnown RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 ACSL4O60488 711 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 GPR1P46091 355 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 SOX10P56693 466 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 MTF1Q14872 753 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 MACC1Q6ZN28 852 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 LPCAT1Q8NF37 534 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 BTBD9Q96Q07 612 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 RNPEPQ9H4A4 650 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 KPNA3O00505 521 aaPredicted RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 KRT16P08779 473 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 PIK3R5Q8WYR1 880 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 ZNF333Q96JL9 665 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 NIF3L1Q9GZT8 377 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 UBQLN1Q9UMX0 589 aaKnown RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 COQ6Q9Y2Z9 468 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 LOC100653049A0A140TA62 436 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 KRT34O76011 436 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 LTFP02788 710 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 CTNNB1P35222 781 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 STAT4Q14765 748 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 AGAP9Q5VTM2 703 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 SHC4Q6S5L8 630 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 CEP41Q9BYV8 373 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 SLC24A3Q9HC58 644 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 ZNF500O60304 480 aaPredicted RBP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 TFE3P19532 575 aaPredicted RBP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 KCNJ1P48048 391 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 CTCFP49711 727 aaPredicted RBP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 C21orf59P57076 290 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 XRCC4Q13426 336 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 CBWD3Q5JTY5 395 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 CBWD5Q5RIA9 395 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 ERVK-7P63135 1459 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 MAGI2Q86UL8 1455 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 SAMD9LQ8IVG5 1584 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 ERI2A8K979 691 aaKnown RBP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 SMNDC1O75940 238 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 HSMCR30P0CW71 290 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 NDUFV1P49821 464 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 ZNF280DQ6N043 979 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 ENGASEQ8NFI3 743 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 GRIN3AQ8TCU5 1115 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 NR2E3Q9Y5X4 410 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 OPLAHO14841 1288 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 ENTPD3O75355 529 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 ZNF189O75820 626 aaPredicted RBP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 COMTP21964 271 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 ACAT1P24752 427 aaKnown RBP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 COL26A1Q96A83 441 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 PRMT6Q96LA8 375 aaPredicted RBP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 CHN1P15882 459 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 GEMP55040 296 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 BEX3Q00994 111 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 CYFIP2Q96F07 1278 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 CELF6Q96J87 481 aaKnown RBP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 CHP1Q99653 195 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 MYOCQ99972 504 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 RSAD1Q9HA92 442 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 STOML1Q9UBI4 398 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 KLHL20Q9Y2M5 609 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 CEP152O94986 1710 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 MTA2O94776 668 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 ORC2Q13416 577 aaPredicted RBP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 SIRT2Q8IXJ6 389 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 DPP10Q8N608 796 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 FHDC1Q9C0D6 1143 aaPredicted RBP14.56□□□□□ -0.08
TRIM13-202ENST00000378182 DPP7Q9UHL4 492 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 ZNHIT2Q9UHR6 403 aa14.56□□□□□ -0.08
TRIM13-202ENST00000378182 IFNA16P05015 189 aa14.55□□□□□ -0.08
TRIM13-202ENST00000378182 VEGFAP15692 232 aaPredicted RBP14.55□□□□□ -0.08
TRIM13-202ENST00000378182 POLR2EP19388 210 aaKnown RBP14.55□□□□□ -0.08
TRIM13-202ENST00000378182 GSSP48637 474 aa14.55□□□□□ -0.08
TRIM13-202ENST00000378182 MRNIPQ6NTE8 343 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms